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  • TISSUE

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  • HIPK2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:82.1 nTPM
HPA Brain:563.0 nTPM
GTEx:82.1 nTPM
Pig:108.6 nTPM
Mouse:22.0 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

563.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 138.3
1961 Female, age 42, unknown 146.1
2226 Male, age 75, left hemisphere 130.5
Dorsomedial nucleus
nTPM: 261.6
2017 Female, age 42, unknown 339.0
1989 Male, age 62, unknown 269.2
2041 Female, age 72, unknown 176.5
Lateral hypothalamic area
nTPM: 295.1
2412 Male, age 62, unknown 432.8
2228 Male, age 66, unknown 263.6
1791 Male, age 80, right hemisphere 243.3
2271 Male, age 75, both hemispheres 240.4
Mammillary body
nTPM: 391.3
1834 Female, age 42, unknown 493.7
1945 Male, age 80, right hemisphere 445.6
1948 Female, age 72, unknown 439.7
2413 Male, age 66, unknown 313.9
1923 Female, age 72, unknown 263.4
Paraventricular nucleus
nTPM: 563.0
2700 Male, age 62, unknown 563.0
Preoptic area
nTPM: 366.5
2414 Female, age 72, unknown 526.4
1861 Female, age 42, unknown 415.4
1907 Male, age 80, right hemisphere 157.6
Supraoptic nucleus
nTPM: 337.3
2835 Female, age 72, unknown 393.0
2043 Male, age 62, unknown 357.3
1894 Female, age 72, unknown 261.4
Ventromedial nucleus
nTPM: 147.8
1982 Female, age 72, unknown 151.5
1822 Female, age 42, unknown 144.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 82.1
Samples: 257

Max nTPM: 519.4
Min nTPM: 7.5
Std nTPM: 74.8
Median nTPM: 59.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 519.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 455.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 420.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 404.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 349.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 331.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 320.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 302.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 288.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 285.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 247.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 244.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 232.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 224.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 223.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 212.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 198.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 181.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 180.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 176.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 176.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 167.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 163.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 159.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 159.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 151.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 150.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 149.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 148.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 144.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 141.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 138.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 137.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 136.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 135.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 134.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 134.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 132.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 130.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 129.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 128.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 125.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 124.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 124.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 120.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 119.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 119.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 117.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 116.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 115.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 111.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 111.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 110.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 110.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 109.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 107.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 107.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 107.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 107.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 106.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 106.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 104.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 100.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 98.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 96.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 96.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 94.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 94.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 94.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 92.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 91.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 89.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 89.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 89.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 87.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 87.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 86.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 85.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 83.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 83.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 82.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 82.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 81.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 80.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 80.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 79.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 79.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 78.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 78.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 78.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 77.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 76.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 75.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 75.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 75.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 73.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 73.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 73.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 72.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 72.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 72.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 72.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 71.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 71.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 70.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 69.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 69.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 68.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 68.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 67.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 66.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 66.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 66.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 65.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 64.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 63.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 63.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 62.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 62.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 62.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 62.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 62.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 60.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 60.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 60.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 60.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 60.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 60.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 59.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 59.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 58.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 58.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 58.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 57.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 57.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 56.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 56.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 54.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 54.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 53.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 53.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 53.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 53.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 52.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 52.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 52.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 52.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 51.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 51.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 51.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 51.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 50.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 50.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 49.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 48.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 48.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 47.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 47.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 47.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 46.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 46.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 46.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 45.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 45.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 45.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 45.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 45.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 45.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 44.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 44.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 44.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 44.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 43.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 43.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 43.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 43.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 43.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 42.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 42.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 42.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 42.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 41.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 41.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 41.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 40.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 40.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 40.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 39.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 39.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 38.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 38.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 38.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 38.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 38.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 37.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 37.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 36.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 36.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 36.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 36.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 35.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 35.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 35.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 34.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 34.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 32.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 32.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 32.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 32.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 31.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 31.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 31.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 31.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 30.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 30.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 29.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 29.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 29.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 28.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 28.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 28.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 28.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 27.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 27.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 27.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 27.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 26.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 26.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 26.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 26.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 26.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 26.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 25.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 25.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 25.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 25.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 24.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 24.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 24.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 24.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 24.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 23.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 22.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 22.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 22.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 20.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 20.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 20.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 20.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 19.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 18.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 17.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 16.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 15.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 15.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 12.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 7.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 108.6
Samples: 4

Max nTPM: 130.5
Min nTPM: 71.0
Sample A Female 118.4
Sample B Female 130.5
Sample C Male 114.6
Sample D Male 71.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 22.0
Samples: 4

Max nTPM: 25.8
Min nTPM: 19.1
Sample A Male 19.1
Sample B Male 21.1
Sample C Female 21.9
Sample D Female 25.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.2
68196925 Antisense, RP_041116_01_F03, Mouse strain C57BL/6J (56 days, male) 0.2

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