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  • SUMMARY

  • TISSUE

  • BRAIN

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  • SP100
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:8.5 nTPM
HPA Brain:29.0 nTPM
GTEx:8.5 nTPM
Pig:10.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 22.3
1961 Female, age 42, unknown 23.8
2226 Male, age 75, left hemisphere 20.7
Dorsomedial nucleus
nTPM: 22.4
2017 Female, age 42, unknown 24.8
2041 Female, age 72, unknown 21.5
1989 Male, age 62, unknown 20.8
Lateral hypothalamic area
nTPM: 22.9
2412 Male, age 62, unknown 27.2
2271 Male, age 75, both hemispheres 25.9
2228 Male, age 66, unknown 20.5
1791 Male, age 80, right hemisphere 18.0
Mammillary body
nTPM: 23.7
1834 Female, age 42, unknown 27.8
2413 Male, age 66, unknown 25.7
1948 Female, age 72, unknown 24.4
1945 Male, age 80, right hemisphere 21.6
1923 Female, age 72, unknown 19.1
Paraventricular nucleus
nTPM: 29.0
2700 Male, age 62, unknown 29.0
Preoptic area
nTPM: 21.0
2414 Female, age 72, unknown 24.6
1861 Female, age 42, unknown 20.7
1907 Male, age 80, right hemisphere 17.7
Supraoptic nucleus
nTPM: 24.8
2835 Female, age 72, unknown 25.2
1894 Female, age 72, unknown 25.1
2043 Male, age 62, unknown 24.0
Ventromedial nucleus
nTPM: 23.6
1822 Female, age 42, unknown 25.8
1982 Female, age 72, unknown 21.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 8.5
Samples: 257

Max nTPM: 34.3
Min nTPM: 2.4
Std nTPM: 4.8
Median nTPM: 7.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 34.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 30.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 25.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 22.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 21.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 21.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 20.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 19.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 19.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 19.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 18.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 18.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 18.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 18.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 17.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 17.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 16.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 16.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 16.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 16.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 15.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 15.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 15.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 15.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 15.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 14.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 14.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 14.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 14.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 13.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 13.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 13.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 13.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 13.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 13.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 13.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 13.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 13.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 13.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 12.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 12.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 12.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 12.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 12.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 12.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 12.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 12.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 11.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 11.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 11.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 11.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 11.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 11.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 11.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 11.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 11.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 11.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 11.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 11.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 11.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 11.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 11.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 10.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 10.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 10.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 10.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 10.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 10.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 10.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 10.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 9.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 9.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 9.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 9.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 9.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 9.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 9.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 9.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 9.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 9.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 9.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 9.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 9.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 9.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 9.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 9.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 9.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 9.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 9.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 9.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 9.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 9.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 9.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 8.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 8.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 8.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 8.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 8.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 8.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 8.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 8.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 8.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 8.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 8.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 8.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 8.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 8.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 8.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 8.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 8.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 8.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 8.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 7.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 7.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 7.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 7.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 7.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 7.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 7.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 7.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 7.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 7.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 7.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 7.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 7.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 7.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 7.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 7.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 7.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 7.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 7.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 7.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 7.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 7.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 7.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 7.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 7.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 6.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 6.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 6.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 6.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 6.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 6.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 6.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 6.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 6.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 6.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 6.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 6.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 6.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 6.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 6.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 6.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 6.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 6.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 6.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 6.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 6.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 6.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 6.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 6.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 6.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 6.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 6.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 6.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 5.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 5.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 5.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 5.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 5.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 5.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 5.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 5.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 5.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 5.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 5.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 5.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 5.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 5.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 5.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 5.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 5.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 5.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 5.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 5.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 5.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 5.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 5.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 5.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 5.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 5.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 5.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 5.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 5.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 5.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 5.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 4.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 4.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 4.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 4.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 4.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 4.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 4.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 4.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 4.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 4.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 4.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 4.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 4.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 4.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 4.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 4.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 4.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 4.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 4.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 4.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 4.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 4.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 4.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 4.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 4.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 4.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 4.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 4.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 4.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 4.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 4.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 4.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 4.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 3.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 3.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 3.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 3.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 3.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 3.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 3.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 3.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 3.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 3.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 3.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 3.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 3.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 3.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 3.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 3.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 3.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 3.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 3.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 3.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 3.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 2.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 2.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 2.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 2.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 2.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 2.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 2.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 10.5
Samples: 4

Max nTPM: 13.3
Min nTPM: 7.3
Sample A Female 7.3
Sample B Female 11.0
Sample C Male 10.5
Sample D Male 13.3

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