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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:13.7 nTPM
HPA Brain:37.0 nTPM
GTEx:13.7 nTPM
Pig:19.7 nTPM
Mouse:15.6 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 19.6
2226 Male, age 75, left hemisphere 22.5
1961 Female, age 42, unknown 16.6
Dorsomedial nucleus
nTPM: 23.9
2017 Female, age 42, unknown 24.7
1989 Male, age 62, unknown 24.1
2041 Female, age 72, unknown 23.0
Lateral hypothalamic area
nTPM: 23.8
2271 Male, age 75, both hemispheres 26.6
2412 Male, age 62, unknown 24.5
2228 Male, age 66, unknown 23.9
1791 Male, age 80, right hemisphere 20.1
Mammillary body
nTPM: 32.2
1945 Male, age 80, right hemisphere 37.2
1834 Female, age 42, unknown 36.2
1948 Female, age 72, unknown 33.3
2413 Male, age 66, unknown 27.3
1923 Female, age 72, unknown 26.9
Paraventricular nucleus
nTPM: 37.0
2700 Male, age 62, unknown 37.0
Preoptic area
nTPM: 27.1
2414 Female, age 72, unknown 38.1
1861 Female, age 42, unknown 23.8
1907 Male, age 80, right hemisphere 19.4
Supraoptic nucleus
nTPM: 27.1
2043 Male, age 62, unknown 30.4
1894 Female, age 72, unknown 27.1
2835 Female, age 72, unknown 23.7
Ventromedial nucleus
nTPM: 20.6
1982 Female, age 72, unknown 20.9
1822 Female, age 42, unknown 20.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 13.7
Samples: 257

Max nTPM: 32.5
Min nTPM: 4.5
Std nTPM: 4.1
Median nTPM: 12.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 32.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 29.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 28.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 26.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 26.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 25.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 24.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 23.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 23.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 22.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 22.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 21.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 21.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 20.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 20.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 20.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 20.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 20.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 20.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 20.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 20.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 19.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 19.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 19.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 19.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 19.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 19.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 19.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 19.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 19.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 19.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 19.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 19.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 18.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 18.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 18.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 18.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 18.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 17.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 17.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 17.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 17.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 17.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 17.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 17.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 16.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 16.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 16.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 16.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 16.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 16.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 16.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 16.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 16.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 16.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 16.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 16.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 16.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 15.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 15.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 15.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 15.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 15.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 15.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 15.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 15.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 15.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 15.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 15.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 15.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 15.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 15.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 15.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 15.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 15.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 15.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 14.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 14.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 14.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 14.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 14.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 14.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 14.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 14.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 14.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 14.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 14.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 14.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 14.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 14.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 14.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 14.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 14.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 14.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 14.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 14.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 13.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 13.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 13.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 13.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 13.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 13.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 13.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 13.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 13.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 13.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 13.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 13.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 13.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 13.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 13.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 13.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 13.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 13.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 13.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 13.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 13.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 12.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 12.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 12.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 12.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 12.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 12.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 12.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 12.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 12.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 12.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 12.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 12.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 12.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 12.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 12.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 12.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 12.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 12.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 12.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 12.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 12.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 12.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 12.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 12.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 12.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 12.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 12.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 12.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 12.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 12.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 12.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 12.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 12.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 12.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 12.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 12.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 12.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 12.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 12.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 11.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 11.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 11.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 11.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 11.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 11.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 11.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 11.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 11.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 11.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 11.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 11.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 11.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 11.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 11.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 11.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 11.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 11.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 11.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 11.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 11.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 11.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 11.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 11.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 11.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 11.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 11.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 11.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 11.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 11.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 11.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 11.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 11.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 11.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 11.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 11.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 10.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 10.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 10.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 10.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 10.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 10.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 10.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 10.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 10.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 10.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 10.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 10.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 10.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 10.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 10.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 10.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 10.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 10.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 10.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 10.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 10.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 10.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 10.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 10.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 10.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 10.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 9.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 9.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 9.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 9.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 9.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 9.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 9.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 9.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 9.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 9.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 9.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 9.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 9.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 9.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 9.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 9.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 9.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 9.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 9.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 9.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 9.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 9.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 9.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 8.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 8.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 8.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 8.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 8.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 8.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 8.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 8.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 8.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 8.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 8.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 8.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 7.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 6.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 6.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 4.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 19.7
Samples: 4

Max nTPM: 23.5
Min nTPM: 18.2
Sample A Female 23.5
Sample B Female 18.3
Sample C Male 18.2
Sample D Male 18.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 15.6
Samples: 4

Max nTPM: 16.7
Min nTPM: 15.0
Sample A Male 15.2
Sample B Male 15.3
Sample C Female 15.0
Sample D Female 16.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.5
67815966 Antisense, RP_040920_02_D09, Mouse strain C57BL/6J (56 days, male) 0.5

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