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  • SUMMARY

  • TISSUE

  • BRAIN

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  • GAL
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expression
Hypothalamusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Neuronal projections: Medium
Synapses: Medium
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

210.576
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:112.2 nTPM
HPA Brain:1423.8 nTPM
GTEx:112.2 nTPM
Pig:38.6 nTPM
Mouse:82.6 nTPM
Allen mouse:3.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA049864
Glial cells Not detected
Neuronal cells Medium
Neuronal projections High
Synapses Medium

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB079779
Hypothalamus mean intensity 210.576
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 16.484
Periventricular hypothalamic nucleus 174.774
Supraoptic nucleus 172.167
Tuberal nucleus 91.715
Ventral tuberomammillary nucleus 197.163
Lateral preoptic area 61.148
Medial preoptic area 102.817
Suprachiasmatic nucleus 34.604
Paraventricular hypothalamic nucleus 85.588
Anterior hypothalamic area, central 50.093
Ventral medial hypothalamic nucleus 27.814
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 210.576
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 44.574
Dorsal medial hypothalamic nucleus 128.299
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1423.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 1423.8
2226 Male, age 75, left hemisphere 2726.5
1961 Female, age 42, unknown 121.2
Dorsomedial nucleus
nTPM: 26.7
2041 Female, age 72, unknown 54.0
1989 Male, age 62, unknown 16.7
2017 Female, age 42, unknown 9.3
Lateral hypothalamic area
nTPM: 64.0
1791 Male, age 80, right hemisphere 104.6
2412 Male, age 62, unknown 77.7
2228 Male, age 66, unknown 43.6
2271 Male, age 75, both hemispheres 30.1
Mammillary body
nTPM: 0.8
2413 Male, age 66, unknown 2.8
1945 Male, age 80, right hemisphere 1.1
1923 Female, age 72, unknown 0.1
1834 Female, age 42, unknown 0.0
1948 Female, age 72, unknown 0.0
Paraventricular nucleus
nTPM: 19.5
2700 Male, age 62, unknown 19.5
Preoptic area
nTPM: 54.5
1907 Male, age 80, right hemisphere 88.4
2414 Female, age 72, unknown 54.0
1861 Female, age 42, unknown 21.1
Supraoptic nucleus
nTPM: 57.9
2043 Male, age 62, unknown 86.1
2835 Female, age 72, unknown 50.4
1894 Female, age 72, unknown 37.3
Ventromedial nucleus
nTPM: 37.8
1822 Female, age 42, unknown 71.8
1982 Female, age 72, unknown 3.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 112.2
Samples: 257

Max nTPM: 2304.8
Min nTPM: 0.0
Std nTPM: 260.8
Median nTPM: 48.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 2304.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 2161.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 1481.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 1246.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 1103.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 945.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 799.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 740.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 593.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 565.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 562.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 550.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 424.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 394.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 375.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 330.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 329.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 303.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 299.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 295.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 254.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 246.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 233.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 230.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 226.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 208.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 204.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 201.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 195.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 174.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 170.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 167.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 167.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 166.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 163.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 162.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 153.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 151.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 145.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 145.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 139.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 133.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 132.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 130.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 129.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 124.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 124.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 120.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 118.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 118.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 115.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 114.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 112.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 112.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 110.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 108.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 107.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 105.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 105.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 104.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 100.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 99.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 95.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 93.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 91.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 90.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 90.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 88.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 86.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 86.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 86.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 86.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 86.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 86.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 82.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 82.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 81.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 80.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 80.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 79.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 79.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 79.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 78.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 78.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 78.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 78.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 77.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 77.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 77.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 75.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 75.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 74.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 73.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 69.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 69.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 69.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 69.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 67.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 67.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 67.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 67.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 65.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 64.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 64.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 63.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 63.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 62.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 62.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 61.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 60.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 59.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 59.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 58.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 57.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 56.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 56.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 55.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 53.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 53.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 52.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 52.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 52.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 51.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 51.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 51.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 50.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 49.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 49.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 48.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 47.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 46.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 42.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 41.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 41.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 41.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 40.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 40.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 40.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 38.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 38.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 37.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 37.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 37.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 36.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 34.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 32.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 32.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 31.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 31.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 30.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 29.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 29.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 29.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 29.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 27.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 27.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 26.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 26.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 26.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 25.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 25.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 24.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 24.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 24.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 23.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 23.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 23.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 22.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 22.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 22.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 22.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 21.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 21.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 21.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 20.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 19.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 19.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 18.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 18.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 17.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 17.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 17.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 17.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 16.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 15.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 15.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 14.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 14.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 14.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 13.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 13.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 12.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 12.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 12.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 12.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 11.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 11.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 11.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 10.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 10.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 10.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 10.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 9.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 8.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 8.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 8.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 8.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 7.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 7.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 7.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 6.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 6.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 6.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 5.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 5.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 5.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 5.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 5.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 4.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 4.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 4.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 4.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 4.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 4.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 3.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 3.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 3.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 3.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 3.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 2.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 2.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 2.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 2.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 2.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 2.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 2.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 1.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 1.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 0.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 0.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 0.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 0.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 0.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 0.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 0.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 0.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 0.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 0.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 0.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 0.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 0.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 0.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 0.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 0.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 38.6
Samples: 4

Max nTPM: 93.7
Min nTPM: 5.7
Sample A Female 25.9
Sample B Female 5.7
Sample C Male 29.0
Sample D Male 93.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 82.6
Samples: 4

Max nTPM: 99.2
Min nTPM: 66.2
Sample A Male 86.6
Sample B Male 99.2
Sample C Female 66.2
Sample D Female 78.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.5
68924578 Antisense, RP_050303_02_F03, Mouse strain C57BL/6J (56 days, male) 3.5
70231997 Antisense, RP_050303_02_F03, Mouse strain C57BL/6J (56 days, male) 2.2

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