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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:118.8 nTPM
HPA Brain:128.2 nTPM
GTEx:118.8 nTPM
Pig:232.9 nTPM
Mouse:415.7 nTPM
Allen mouse:9.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

128.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 112.9
2226 Male, age 75, left hemisphere 118.9
1961 Female, age 42, unknown 106.9
Dorsomedial nucleus
nTPM: 106.3
2041 Female, age 72, unknown 115.7
1989 Male, age 62, unknown 104.8
2017 Female, age 42, unknown 98.5
Lateral hypothalamic area
nTPM: 128.2
2228 Male, age 66, unknown 146.3
2271 Male, age 75, both hemispheres 137.4
1791 Male, age 80, right hemisphere 121.2
2412 Male, age 62, unknown 107.7
Mammillary body
nTPM: 104.4
1923 Female, age 72, unknown 116.1
2413 Male, age 66, unknown 113.0
1948 Female, age 72, unknown 101.8
1945 Male, age 80, right hemisphere 95.5
1834 Female, age 42, unknown 95.3
Paraventricular nucleus
nTPM: 107.7
2700 Male, age 62, unknown 107.7
Preoptic area
nTPM: 110.7
1907 Male, age 80, right hemisphere 126.2
2414 Female, age 72, unknown 106.3
1861 Female, age 42, unknown 99.5
Supraoptic nucleus
nTPM: 102.3
1894 Female, age 72, unknown 107.7
2043 Male, age 62, unknown 103.6
2835 Female, age 72, unknown 95.5
Ventromedial nucleus
nTPM: 113.8
1982 Female, age 72, unknown 114.4
1822 Female, age 42, unknown 113.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 118.8
Samples: 257

Max nTPM: 225.3
Min nTPM: 58.0
Std nTPM: 26.9
Median nTPM: 117.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 225.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 202.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 197.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 188.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 183.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 182.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 172.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 171.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 168.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 167.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 166.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 165.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 165.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 162.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 161.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 160.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 158.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 158.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 156.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 156.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 155.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 155.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 153.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 153.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 153.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 152.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 150.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 150.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 149.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 149.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 149.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 149.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 149.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 147.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 147.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 147.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 146.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 146.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 146.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 145.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 145.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 144.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 144.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 144.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 144.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 143.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 143.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 143.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 142.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 141.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 141.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 141.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 141.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 141.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 140.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 140.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 139.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 139.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 138.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 138.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 138.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 137.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 137.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 137.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 136.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 135.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 135.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 135.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 135.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 134.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 134.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 134.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 134.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 134.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 133.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 133.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 132.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 131.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 131.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 131.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 131.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 130.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 130.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 129.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 129.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 129.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 128.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 128.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 128.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 128.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 127.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 127.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 127.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 126.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 126.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 126.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 125.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 125.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 125.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 125.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 125.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 124.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 124.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 124.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 124.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 123.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 123.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 122.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 122.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 122.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 122.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 122.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 121.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 121.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 120.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 120.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 119.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 119.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 119.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 119.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 118.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 118.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 118.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 118.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 118.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 118.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 117.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 117.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 117.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 117.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 116.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 116.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 116.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 115.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 115.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 115.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 114.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 114.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 114.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 113.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 113.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 113.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 113.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 112.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 112.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 112.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 112.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 112.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 111.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 111.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 111.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 111.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 111.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 110.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 110.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 110.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 110.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 109.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 109.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 109.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 108.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 108.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 107.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 107.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 107.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 107.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 106.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 106.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 105.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 105.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 104.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 104.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 104.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 103.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 103.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 103.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 103.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 103.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 102.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 102.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 102.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 102.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 102.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 102.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 102.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 101.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 101.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 101.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 101.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 100.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 100.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 99.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 99.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 99.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 99.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 99.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 99.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 97.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 97.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 97.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 97.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 97.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 97.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 96.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 95.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 95.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 95.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 95.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 93.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 93.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 92.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 92.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 92.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 91.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 90.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 90.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 89.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 89.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 89.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 89.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 88.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 88.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 88.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 88.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 87.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 87.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 87.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 87.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 86.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 86.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 85.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 85.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 85.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 84.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 84.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 84.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 84.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 83.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 83.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 83.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 83.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 83.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 81.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 80.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 79.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 78.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 77.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 76.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 74.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 74.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 70.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 69.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 68.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 66.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 65.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 61.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 58.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

232.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 232.9
Samples: 4

Max nTPM: 285.2
Min nTPM: 191.9
Sample A Female 285.2
Sample B Female 241.4
Sample C Male 213.0
Sample D Male 191.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

415.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 415.7
Samples: 4

Max nTPM: 438.0
Min nTPM: 392.1
Sample A Male 392.1
Sample B Male 438.0
Sample C Female 433.2
Sample D Female 399.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.1
71021145 Antisense, RP_050526_02_G07, Mouse strain C57BL/6J (56 days, male) 9.1

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