We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
XRCC1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • XRCC1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:16.3 nTPM
HPA Brain:25.6 nTPM
GTEx:16.3 nTPM
Pig:8.9 nTPM
Mouse:10.6 nTPM
Allen mouse:1.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 23.0
1961 Female, age 42, unknown 24.6
2226 Male, age 75, left hemisphere 21.4
Dorsomedial nucleus
nTPM: 24.9
1989 Male, age 62, unknown 27.3
2041 Female, age 72, unknown 24.5
2017 Female, age 42, unknown 22.9
Lateral hypothalamic area
nTPM: 21.0
2228 Male, age 66, unknown 21.6
2412 Male, age 62, unknown 21.2
2271 Male, age 75, both hemispheres 20.8
1791 Male, age 80, right hemisphere 20.5
Mammillary body
nTPM: 21.0
2413 Male, age 66, unknown 22.9
1834 Female, age 42, unknown 21.6
1923 Female, age 72, unknown 21.1
1948 Female, age 72, unknown 19.9
1945 Male, age 80, right hemisphere 19.6
Paraventricular nucleus
nTPM: 25.6
2700 Male, age 62, unknown 25.6
Preoptic area
nTPM: 22.0
2414 Female, age 72, unknown 22.6
1861 Female, age 42, unknown 21.9
1907 Male, age 80, right hemisphere 21.5
Supraoptic nucleus
nTPM: 21.6
2835 Female, age 72, unknown 23.8
2043 Male, age 62, unknown 20.5
1894 Female, age 72, unknown 20.4
Ventromedial nucleus
nTPM: 23.1
1822 Female, age 42, unknown 23.9
1982 Female, age 72, unknown 22.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 16.3
Samples: 257

Max nTPM: 25.1
Min nTPM: 9.2
Std nTPM: 2.8
Median nTPM: 15.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 25.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 22.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 22.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 22.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 22.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 22.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 22.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 21.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 21.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 21.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 21.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 21.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 21.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 21.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 20.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 20.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 20.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 20.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 20.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 20.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 20.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 20.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 20.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 20.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 20.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 20.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 20.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 19.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 19.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 19.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 19.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 19.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 19.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 19.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 19.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 19.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 19.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 19.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 19.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 19.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 19.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 19.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 19.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 19.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 19.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 19.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 19.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 19.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 19.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 18.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 18.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 18.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 18.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 18.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 18.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 18.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 18.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 18.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 18.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 18.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 18.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 18.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 18.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 18.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 18.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 18.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 18.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 18.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 18.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 18.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 18.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 18.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 18.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 18.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 18.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 18.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 18.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 18.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 17.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 17.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 17.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 17.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 17.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 17.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 17.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 17.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 17.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 17.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 17.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 17.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 17.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 17.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 17.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 17.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 17.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 17.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 17.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 17.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 17.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 17.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 17.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 17.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 17.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 16.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 16.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 16.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 16.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 16.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 16.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 16.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 16.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 16.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 16.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 16.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 16.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 16.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 16.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 16.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 16.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 16.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 16.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 16.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 16.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 16.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 16.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 16.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 16.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 16.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 15.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 15.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 15.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 15.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 15.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 15.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 15.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 15.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 15.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 15.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 15.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 15.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 15.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 15.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 15.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 15.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 15.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 15.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 15.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 15.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 15.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 15.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 15.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 15.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 15.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 15.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 15.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 15.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 15.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 15.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 15.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 15.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 15.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 15.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 15.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 15.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 15.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 15.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 15.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 15.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 15.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 15.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 15.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 14.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 14.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 14.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 14.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 14.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 14.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 14.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 14.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 14.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 14.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 14.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 14.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 14.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 14.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 14.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 14.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 14.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 14.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 14.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 14.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 14.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 14.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 14.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 14.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 14.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 14.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 14.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 14.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 14.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 14.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 14.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 14.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 14.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 14.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 14.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 13.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 13.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 13.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 13.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 13.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 13.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 13.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 13.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 13.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 13.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 13.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 13.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 13.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 13.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 13.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 13.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 13.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 13.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 13.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 13.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 13.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 13.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 13.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 13.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 12.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 12.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 12.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 12.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 12.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 12.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 12.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 12.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 11.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 11.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 11.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 11.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 11.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 11.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 11.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 11.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 11.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 11.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 10.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 10.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 10.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 10.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 9.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 9.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 9.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 9.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 9.2
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 8.9
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.7
Sample A Female 9.1
Sample B Female 9.3
Sample C Male 9.6
Sample D Male 7.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 10.6
Samples: 4

Max nTPM: 11.5
Min nTPM: 10.0
Sample A Male 10.4
Sample B Male 11.5
Sample C Female 10.4
Sample D Female 10.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.9
69014746 Antisense, RP_050310_01_F05, Mouse strain C57BL/6J (56 days, male) 1.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo