HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:73.8 nTPM
HPA Brain:245.3 nTPM
GTEx:73.8 nTPM
FANTOM5:198.4 Scaled Tags Per Million
Pig:159.4 nTPM
Mouse:93.8 nTPM
Allen mouse:7.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019053Antibody HPA019061
Glial cells LowNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 245.3
Sample id Sample description nTPM
Hippocampus
nTPM: 204.2
2621 Female, age 67, right hemisphere 222.2
1898 Male, age 80, left hemisphere 215.6
2529 Female, age 94, left hemisphere 210.3
1911 Female, age 85, right hemisphere 207.1
1855 Male, age 76, left hemisphere 201.8
2148 Female, age 91, left hemisphere 167.9
Dentate gyrus
nTPM: 205.9
2530 Female, age 94, left hemisphere 280.4
2010 Male, age 76, both hemispheres 216.1
2246 Female, age 85, both hemispheres 204.3
1927 Female, age 91, both hemispheres 184.5
2528 Male, age 74, both hemispheres 176.4
2531 Female, age 67, both hemispheres 173.6
Entorhinal gyrus
nTPM: 215.8
2686 Male, age 75, right hemisphere 270.6
2117 Female, age 91, right hemisphere 250.6
1938 Female, age 85, left hemisphere 210.8
2764 Male, age 80, right hemisphere 196.3
2613 Female, age 94, left hemisphere 192.7
1787 Male, age 76, left hemisphere 173.6
Hippocampus, CA1
nTPM: 182.1
2749 Male, age 80, left hemisphere 196.1
1873 Female, age 85, both hemispheres 194.9
2527 Male, age 74, both hemispheres 186.8
2082 Female, age 91, right hemisphere 166.4
2045 Male, age 76, both hemispheres 166.3
Hippocampus, CA2
nTPM: 204.0
1963 Male, age 80, left hemisphere 230.6
2437 Female, age 94, left hemisphere 230.5
1940 Female, age 85, left hemisphere 210.1
2249 Male, age 74, both hemispheres 188.5
1892 Male, age 76, both hemispheres 185.2
2113 Female, age 91, right hemisphere 178.9
Hippocampus, CA3
nTPM: 182.9
1891 Female, age 85, both hemispheres 229.3
1867 Male, age 76, both hemispheres 219.7
2137 Male, age 80, left hemisphere 181.8
2436 Male, age 74, both hemispheres 176.2
2861 Female, age 67, both hemispheres 155.0
2620 Female, age 94, left hemisphere 135.6
Parahippocampal cortex
nTPM: 203.8
2532 Female, age 72, left hemisphere 248.9
1850 Male, age 80, both hemispheres 240.2
2692 Male, age 74, both hemispheres 220.0
2018 Male, age 76, both hemispheres 216.4
1990 Female, age 91, right hemisphere 209.9
1933 Female, age 85, both hemispheres 198.7
2245 Female, age 91, both hemispheres 192.0
2693 Female, age 94, both hemispheres 178.0
2250 Female, age 67, right hemisphere 172.7
2622 Female, age 67, right hemisphere 161.5
Perirhinal gyrus
nTPM: 192.2
1841 Female, age 85, right hemisphere 205.6
1847 Female, age 91, left hemisphere 193.0
2848 Male, age 76, right hemisphere 192.3
1794 Male, age 80, right hemisphere 191.2
2521 Female, age 94, right hemisphere 178.8
Subiculum
nTPM: 245.3
2438 Female, age 94, left hemisphere 313.9
2042 Male, age 76, both hemispheres 307.4
1901 Male, age 80, both hemispheres 250.1
1977 Female, age 85, both hemispheres 208.3
2619 Male, age 74, both hemispheres 200.8
2729 Female, age 91, right hemisphere 191.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 73.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.8
Samples: 255

Max nTPM: 159.9
Min nTPM: 32.6
Std nTPM: 24.2
Median nTPM: 68.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 159.9
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 156.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 153.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 143.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 137.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 136.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 135.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 134.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 130.8
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 130.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 128.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 198.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 198.4
FF:10153-102I9 76 years, female 205.7
FF:10169-103B7 60 years, female 191.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 159.4
Pig sample Sample description nTPM
Subiculum
nTPM: 106.8
Samples: 4

Max nTPM: 124.2
Min nTPM: 98.4
Sample A Female 124.2
Sample B Female 98.8
Sample C Male 98.4
Sample D Male 105.6
Dorsal hippocampus
nTPM: 159.4
Samples: 4

Max nTPM: 201.9
Min nTPM: 105.7
Sample A Female 201.9
Sample B Female 139.6
Sample C Male 190.3
Sample D Male 105.7
Entorhinal cortex
nTPM: 115.3
Samples: 4

Max nTPM: 139.5
Min nTPM: 99.9
Sample A Female 108.3
Sample B Female 139.5
Sample C Male 113.6
Sample D Male 99.9
Ventral hippocampus
nTPM: 120.9
Samples: 4

Max nTPM: 146.3
Min nTPM: 97.8
Sample A Female 134.3
Sample B Female 97.8
Sample C Male 105.0
Sample D Male 146.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 93.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.7
Samples: 4

Max nTPM: 85.1
Min nTPM: 82.1
Sample A Male 83.7
Sample B Male 82.1
Sample C Female 85.1
Sample D Female 83.9
Hippocampal formation
nTPM: 93.8
Samples: 4

Max nTPM: 102.4
Min nTPM: 87.1
Sample A Male 87.8
Sample B Male 98.0
Sample C Female 102.4
Sample D Female 87.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.2
68301539 Antisense, RP_041130_01_D08, Mouse strain C57BL/6J (56 days, male) 7.2

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