HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:77.5 nTPM
HPA Brain:86.4 nTPM
GTEx:77.5 nTPM
Pig:315.7 nTPM
Mouse:668.6 nTPM
Allen mouse:29.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003154Antibody CAB009324
Glial cells Not detectedNot detected
Neuronal cells HighMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 86.4
Sample id Sample description nTPM
Hippocampus
nTPM: 48.3
1898 Male, age 80, left hemisphere 90.5
2621 Female, age 67, right hemisphere 62.7
2148 Female, age 91, left hemisphere 46.7
1855 Male, age 76, left hemisphere 36.8
1911 Female, age 85, right hemisphere 28.3
2529 Female, age 94, left hemisphere 24.8
Dentate gyrus
nTPM: 55.7
1927 Female, age 91, both hemispheres 107.8
2010 Male, age 76, both hemispheres 58.0
2246 Female, age 85, both hemispheres 47.1
2530 Female, age 94, left hemisphere 46.9
2531 Female, age 67, both hemispheres 38.5
2528 Male, age 74, both hemispheres 36.0
Entorhinal gyrus
nTPM: 38.8
2764 Male, age 80, right hemisphere 53.6
1938 Female, age 85, left hemisphere 50.8
2613 Female, age 94, left hemisphere 48.3
1787 Male, age 76, left hemisphere 39.9
2117 Female, age 91, right hemisphere 21.0
2686 Male, age 75, right hemisphere 19.1
Hippocampus, CA1
nTPM: 68.5
2749 Male, age 80, left hemisphere 134.4
1873 Female, age 85, both hemispheres 68.9
2527 Male, age 74, both hemispheres 62.8
2082 Female, age 91, right hemisphere 40.7
2045 Male, age 76, both hemispheres 35.4
Hippocampus, CA2
nTPM: 55.6
1892 Male, age 76, both hemispheres 92.4
1963 Male, age 80, left hemisphere 91.2
2249 Male, age 74, both hemispheres 47.1
1940 Female, age 85, left hemisphere 44.1
2113 Female, age 91, right hemisphere 36.0
2437 Female, age 94, left hemisphere 22.6
Hippocampus, CA3
nTPM: 48.4
2137 Male, age 80, left hemisphere 92.3
1867 Male, age 76, both hemispheres 53.8
2620 Female, age 94, left hemisphere 38.8
2436 Male, age 74, both hemispheres 35.8
2861 Female, age 67, both hemispheres 34.9
1891 Female, age 85, both hemispheres 34.7
Parahippocampal cortex
nTPM: 49.9
1850 Male, age 80, both hemispheres 75.4
2245 Female, age 91, both hemispheres 75.4
1990 Female, age 91, right hemisphere 73.1
2250 Female, age 67, right hemisphere 59.6
1933 Female, age 85, both hemispheres 52.2
2532 Female, age 72, left hemisphere 41.1
2018 Male, age 76, both hemispheres 39.5
2693 Female, age 94, both hemispheres 32.7
2622 Female, age 67, right hemisphere 27.5
2692 Male, age 74, both hemispheres 22.9
Perirhinal gyrus
nTPM: 86.4
1847 Female, age 91, left hemisphere 144.1
2521 Female, age 94, right hemisphere 109.5
1794 Male, age 80, right hemisphere 79.3
1841 Female, age 85, right hemisphere 61.7
2848 Male, age 76, right hemisphere 37.4
Subiculum
nTPM: 37.0
1901 Male, age 80, both hemispheres 58.2
1977 Female, age 85, both hemispheres 52.0
2438 Female, age 94, left hemisphere 35.3
2619 Male, age 74, both hemispheres 29.7
2042 Male, age 76, both hemispheres 26.8
2729 Female, age 91, right hemisphere 20.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 77.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.5
Samples: 255

Max nTPM: 340.8
Min nTPM: 10.2
Std nTPM: 58.8
Median nTPM: 62.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 340.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 255.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 254.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 253.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 248.8
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 243.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 238.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 230.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 227.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 218.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 209.0
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HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 315.7
Pig sample Sample description nTPM
Subiculum
nTPM: 214.6
Samples: 4

Max nTPM: 235.1
Min nTPM: 182.5
Sample A Female 215.9
Sample B Female 182.5
Sample C Male 224.9
Sample D Male 235.1
Dorsal hippocampus
nTPM: 315.8
Samples: 4

Max nTPM: 430.7
Min nTPM: 221.7
Sample A Female 430.7
Sample B Female 340.2
Sample C Male 270.4
Sample D Male 221.7
Entorhinal cortex
nTPM: 249.5
Samples: 4

Max nTPM: 275.9
Min nTPM: 228.1
Sample A Female 265.2
Sample B Female 275.9
Sample C Male 228.8
Sample D Male 228.1
Ventral hippocampus
nTPM: 299.5
Samples: 4

Max nTPM: 433.1
Min nTPM: 179.8
Sample A Female 433.1
Sample B Female 179.8
Sample C Male 332.5
Sample D Male 252.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 668.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 534.9
Samples: 4

Max nTPM: 652.4
Min nTPM: 467.8
Sample A Male 468.2
Sample B Male 467.8
Sample C Female 551.0
Sample D Female 652.4
Hippocampal formation
nTPM: 668.6
Samples: 4

Max nTPM: 748.8
Min nTPM: 602.5
Sample A Male 608.8
Sample B Male 714.2
Sample C Female 748.8
Sample D Female 602.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 29.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 29.5
356092 Antisense, RP_040617_02_C08, Mouse strain C57BL/6J (56 days, male) 29.5
294021 Antisense, RP_040617_02_C08, Mouse strain C57BL/6J (56 days, male) 24.0

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