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SLC25A3
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  • SUMMARY

  • TISSUE

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  • SLC25A3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:187.4 nTPM
HPA Brain:249.8 nTPM
GTEx:187.4 nTPM
Pig:174.7 nTPM
Mouse:253.4 nTPM
Allen mouse:15.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

249.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 177.2
2226 Male, age 75, left hemisphere 205.7
1961 Female, age 42, unknown 148.6
Dorsomedial nucleus
nTPM: 179.1
1989 Male, age 62, unknown 210.6
2041 Female, age 72, unknown 170.9
2017 Female, age 42, unknown 155.7
Lateral hypothalamic area
nTPM: 202.7
1791 Male, age 80, right hemisphere 251.3
2228 Male, age 66, unknown 206.6
2271 Male, age 75, both hemispheres 196.6
2412 Male, age 62, unknown 156.3
Mammillary body
nTPM: 249.8
1923 Female, age 72, unknown 391.3
2413 Male, age 66, unknown 240.7
1834 Female, age 42, unknown 229.2
1948 Female, age 72, unknown 212.9
1945 Male, age 80, right hemisphere 174.9
Paraventricular nucleus
nTPM: 129.9
2700 Male, age 62, unknown 129.9
Preoptic area
nTPM: 177.3
1907 Male, age 80, right hemisphere 203.0
1861 Female, age 42, unknown 182.7
2414 Female, age 72, unknown 146.2
Supraoptic nucleus
nTPM: 183.9
1894 Female, age 72, unknown 192.4
2835 Female, age 72, unknown 186.2
2043 Male, age 62, unknown 173.3
Ventromedial nucleus
nTPM: 160.2
1982 Female, age 72, unknown 180.4
1822 Female, age 42, unknown 139.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

187.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 187.4
Samples: 257

Max nTPM: 302.1
Min nTPM: 97.0
Std nTPM: 37.4
Median nTPM: 186.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 302.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 297.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 291.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 290.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 288.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 285.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 285.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 279.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 266.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 266.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 263.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 257.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 252.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 249.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 246.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 246.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 246.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 245.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 245.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 245.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 243.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 243.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 239.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 238.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 236.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 235.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 234.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 234.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 233.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 233.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 229.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 229.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 228.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 227.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 226.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 224.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 224.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 224.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 223.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 222.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 221.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 219.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 219.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 218.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 216.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 216.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 216.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 216.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 214.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 214.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 212.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 212.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 212.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 211.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 210.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 210.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 210.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 210.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 209.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 208.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 208.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 208.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 208.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 208.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 207.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 207.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 207.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 207.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 207.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 206.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 206.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 206.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 206.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 206.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 206.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 205.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 205.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 204.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 204.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 204.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 204.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 204.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 204.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 203.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 203.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 202.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 202.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 202.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 201.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 201.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 200.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 199.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 199.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 199.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 198.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 198.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 197.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 197.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 196.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 195.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 195.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 195.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 194.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 194.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 194.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 194.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 193.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 192.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 192.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 192.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 192.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 192.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 191.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 190.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 190.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 190.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 189.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 188.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 188.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 188.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 188.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 188.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 188.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 188.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 187.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 187.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 186.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 186.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 186.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 186.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 185.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 184.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 184.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 183.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 183.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 183.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 183.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 183.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 181.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 181.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 181.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 181.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 181.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 180.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 180.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 180.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 180.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 179.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 178.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 178.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 177.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 177.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 174.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 174.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 173.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 173.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 173.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 173.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 173.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 172.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 171.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 170.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 170.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 170.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 170.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 169.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 169.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 169.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 169.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 169.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 167.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 167.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 167.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 167.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 166.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 166.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 166.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 166.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 166.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 165.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 165.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 165.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 165.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 164.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 163.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 163.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 163.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 163.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 163.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 162.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 162.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 161.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 160.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 160.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 160.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 160.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 159.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 158.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 158.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 158.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 157.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 157.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 157.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 157.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 156.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 155.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 155.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 154.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 154.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 154.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 154.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 154.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 154.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 153.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 153.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 152.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 152.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 152.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 151.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 151.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 151.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 150.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 148.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 148.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 147.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 147.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 147.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 145.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 144.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 144.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 143.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 143.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 142.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 142.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 142.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 141.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 137.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 137.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 136.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 135.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 133.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 132.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 132.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 131.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 130.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 129.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 128.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 128.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 128.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 128.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 120.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 116.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 111.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 110.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 109.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 105.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 97.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

174.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 174.7
Samples: 4

Max nTPM: 226.5
Min nTPM: 119.5
Sample A Female 226.5
Sample B Female 187.5
Sample C Male 165.1
Sample D Male 119.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

253.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 253.4
Samples: 4

Max nTPM: 274.0
Min nTPM: 241.2
Sample A Male 241.2
Sample B Male 274.0
Sample C Female 255.2
Sample D Female 243.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 15.4
972 Antisense, RP_Baylor_102959, Mouse strain C57BL/6J (56 days, male) 15.4
975 Antisense, RP_Baylor_102959, Mouse strain C57BL/6J (56 days, male) 12.1

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