HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:72.7 nTPM
HPA Brain:191.3 nTPM
GTEx:72.7 nTPM
FANTOM5:131.1 Scaled Tags Per Million
Pig:172.5 nTPM
Mouse:100.0 nTPM
Allen mouse:6.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038621Antibody HPA038622
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 191.3
Sample id Sample description nTPM
Hippocampus
nTPM: 139.3
1898 Male, age 80, left hemisphere 179.5
1855 Male, age 76, left hemisphere 170.2
2148 Female, age 91, left hemisphere 147.0
2621 Female, age 67, right hemisphere 134.5
2529 Female, age 94, left hemisphere 106.1
1911 Female, age 85, right hemisphere 98.2
Dentate gyrus
nTPM: 150.9
2530 Female, age 94, left hemisphere 180.3
2010 Male, age 76, both hemispheres 177.5
1927 Female, age 91, both hemispheres 162.0
2531 Female, age 67, both hemispheres 142.4
2528 Male, age 74, both hemispheres 127.6
2246 Female, age 85, both hemispheres 115.7
Entorhinal gyrus
nTPM: 153.1
2764 Male, age 80, right hemisphere 199.0
2613 Female, age 94, left hemisphere 177.5
1938 Female, age 85, left hemisphere 168.5
1787 Male, age 76, left hemisphere 157.8
2686 Male, age 75, right hemisphere 112.8
2117 Female, age 91, right hemisphere 102.8
Hippocampus, CA1
nTPM: 162.3
2749 Male, age 80, left hemisphere 275.6
2045 Male, age 76, both hemispheres 153.9
1873 Female, age 85, both hemispheres 149.0
2527 Male, age 74, both hemispheres 124.0
2082 Female, age 91, right hemisphere 108.9
Hippocampus, CA2
nTPM: 147.8
1963 Male, age 80, left hemisphere 202.7
1892 Male, age 76, both hemispheres 190.7
2437 Female, age 94, left hemisphere 137.1
1940 Female, age 85, left hemisphere 133.0
2113 Female, age 91, right hemisphere 120.4
2249 Male, age 74, both hemispheres 103.2
Hippocampus, CA3
nTPM: 155.5
2137 Male, age 80, left hemisphere 218.3
2861 Female, age 67, both hemispheres 182.0
2620 Female, age 94, left hemisphere 170.7
1867 Male, age 76, both hemispheres 160.1
2436 Male, age 74, both hemispheres 103.2
1891 Female, age 85, both hemispheres 98.6
Parahippocampal cortex
nTPM: 150.3
1850 Male, age 80, both hemispheres 193.1
2532 Female, age 72, left hemisphere 166.8
1933 Female, age 85, both hemispheres 162.8
2245 Female, age 91, both hemispheres 158.6
1990 Female, age 91, right hemisphere 155.0
2622 Female, age 67, right hemisphere 149.1
2018 Male, age 76, both hemispheres 143.7
2693 Female, age 94, both hemispheres 133.5
2250 Female, age 67, right hemisphere 122.0
2692 Male, age 74, both hemispheres 118.6
Perirhinal gyrus
nTPM: 191.3
1794 Male, age 80, right hemisphere 234.4
1847 Female, age 91, left hemisphere 222.3
2521 Female, age 94, right hemisphere 182.2
1841 Female, age 85, right hemisphere 174.7
2848 Male, age 76, right hemisphere 143.0
Subiculum
nTPM: 113.8
1977 Female, age 85, both hemispheres 142.2
1901 Male, age 80, both hemispheres 136.0
2729 Female, age 91, right hemisphere 111.3
2619 Male, age 74, both hemispheres 109.5
2042 Male, age 76, both hemispheres 104.2
2438 Female, age 94, left hemisphere 79.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 72.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.7
Samples: 255

Max nTPM: 172.5
Min nTPM: 21.4
Std nTPM: 29.9
Median nTPM: 71.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 172.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 172.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 169.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 161.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 155.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 150.6
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 145.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 143.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 137.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 131.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 131.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 131.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 131.1
FF:10169-103B7 60 years, female 153.7
FF:10153-102I9 76 years, female 108.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 172.5
Pig sample Sample description nTPM
Subiculum
nTPM: 147.1
Samples: 4

Max nTPM: 206.6
Min nTPM: 113.1
Sample A Female 206.6
Sample B Female 135.1
Sample C Male 133.7
Sample D Male 113.1
Dorsal hippocampus
nTPM: 172.5
Samples: 4

Max nTPM: 251.2
Min nTPM: 122.6
Sample A Female 251.2
Sample B Female 191.0
Sample C Male 125.1
Sample D Male 122.6
Entorhinal cortex
nTPM: 159.2
Samples: 4

Max nTPM: 182.8
Min nTPM: 123.3
Sample A Female 166.7
Sample B Female 163.8
Sample C Male 182.8
Sample D Male 123.3
Ventral hippocampus
nTPM: 172.0
Samples: 4

Max nTPM: 211.3
Min nTPM: 116.1
Sample A Female 198.3
Sample B Female 116.1
Sample C Male 211.3
Sample D Male 162.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 100.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 91.3
Samples: 4

Max nTPM: 94.8
Min nTPM: 87.1
Sample A Male 87.1
Sample B Male 90.4
Sample C Female 92.7
Sample D Female 94.8
Hippocampal formation
nTPM: 100.0
Samples: 4

Max nTPM: 107.0
Min nTPM: 96.7
Sample A Male 99.0
Sample B Male 96.7
Sample C Female 107.0
Sample D Female 97.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
68798244 Antisense, RP_050215_02_A10, Mouse strain C57BL/6J (56 days, male) 6.3

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