We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
LPCAT2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • LPCAT2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

35.319
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:4.2 nTPM
HPA Brain:18.7 nTPM
GTEx:4.2 nTPM
Pig:15.4 nTPM
Mouse:5.7 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA008433
Hypothalamus mean intensity 35.319
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 13.970
Mammillary nucleus 7.295
Periventricular hypothalamic nucleus 35.319
Supraoptic nucleus -
Tuberal nucleus 21.627
Ventral tuberomammillary nucleus -
Lateral preoptic area 18.173
Medial preoptic area 17.553
Suprachiasmatic nucleus 28.239
Paraventricular hypothalamic nucleus 5.964
Anterior hypothalamic area, central 7.207
Ventral medial hypothalamic nucleus 11.790
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 18.620
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 9.317
Dorsal medial hypothalamic nucleus 13.390
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 7.2
2226 Male, age 75, left hemisphere 10.5
1961 Female, age 42, unknown 3.9
Dorsomedial nucleus
nTPM: 8.7
2017 Female, age 42, unknown 9.4
2041 Female, age 72, unknown 8.5
1989 Male, age 62, unknown 8.1
Lateral hypothalamic area
nTPM: 14.7
2271 Male, age 75, both hemispheres 24.2
1791 Male, age 80, right hemisphere 12.2
2412 Male, age 62, unknown 12.1
2228 Male, age 66, unknown 10.3
Mammillary body
nTPM: 15.7
1945 Male, age 80, right hemisphere 18.5
1834 Female, age 42, unknown 17.0
1948 Female, age 72, unknown 15.6
2413 Male, age 66, unknown 15.4
1923 Female, age 72, unknown 12.1
Paraventricular nucleus
nTPM: 13.3
2700 Male, age 62, unknown 13.3
Preoptic area
nTPM: 9.5
2414 Female, age 72, unknown 13.3
1861 Female, age 42, unknown 9.9
1907 Male, age 80, right hemisphere 5.3
Supraoptic nucleus
nTPM: 18.7
1894 Female, age 72, unknown 23.2
2043 Male, age 62, unknown 21.4
2835 Female, age 72, unknown 11.5
Ventromedial nucleus
nTPM: 4.9
1982 Female, age 72, unknown 5.4
1822 Female, age 42, unknown 4.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 4.2
Samples: 257

Max nTPM: 14.4
Min nTPM: 0.8
Std nTPM: 2.3
Median nTPM: 3.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 14.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 13.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 13.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 10.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 10.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 10.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 10.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 10.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 9.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 9.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 9.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 9.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 9.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 8.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 8.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 8.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 8.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 8.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 8.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 8.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 7.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 7.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 7.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 7.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 7.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 7.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 7.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 7.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 7.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 7.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 7.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 6.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 6.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 6.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 6.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 6.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 6.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 6.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 6.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 6.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 6.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 6.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 6.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 6.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 6.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 6.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 6.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 6.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 5.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 5.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 5.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 5.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 5.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 5.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 5.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 5.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 5.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 5.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 5.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 5.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 5.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 5.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 5.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 5.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 5.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 5.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 5.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 5.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 4.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 4.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 4.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 4.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 4.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 4.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 4.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 4.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 4.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 4.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 4.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 4.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 4.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 4.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 4.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 4.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 4.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 4.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 4.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 4.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 4.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 4.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 4.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 4.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 4.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 4.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 4.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 4.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 4.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 4.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 4.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 4.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 4.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 4.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 4.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 4.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 4.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 4.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 4.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 4.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 4.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 3.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 3.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 3.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 3.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 3.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 3.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 3.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 3.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 3.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 3.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 3.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 3.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 3.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 3.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 3.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 3.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 3.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 3.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 3.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 3.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 3.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 3.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 3.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 3.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 3.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 3.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 3.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 3.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 3.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 3.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 3.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 3.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 3.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 3.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 3.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 3.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 3.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 3.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 3.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 3.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 3.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 3.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 3.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 3.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 3.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 3.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 3.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 3.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 3.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 3.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 2.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 2.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 2.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 2.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 2.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 2.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 2.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 2.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 2.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 2.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 2.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 2.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 2.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 2.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 2.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 2.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 2.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 2.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 2.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 2.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 2.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 2.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 2.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 2.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 2.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 2.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 2.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 2.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 2.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 2.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 2.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 2.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 2.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 2.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 2.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 2.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 2.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 2.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 2.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 2.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 2.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 2.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 2.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 2.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 2.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 2.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 2.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 2.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 2.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 2.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 2.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 2.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 2.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 2.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 2.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 2.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 2.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 2.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 2.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 2.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 2.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 2.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 2.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 2.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 2.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 2.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 2.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 2.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 1.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 1.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 1.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 1.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 1.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 1.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 1.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 1.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 1.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 1.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 1.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 1.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 1.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 1.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 1.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 1.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 1.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 1.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 1.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 1.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 1.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 0.8
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 15.4
Samples: 4

Max nTPM: 20.8
Min nTPM: 11.4
Sample A Female 20.8
Sample B Female 13.1
Sample C Male 16.4
Sample D Male 11.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 5.7
Samples: 4

Max nTPM: 6.9
Min nTPM: 4.9
Sample A Male 5.2
Sample B Male 5.9
Sample C Female 4.9
Sample D Female 6.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.5
70305251 Antisense, RP_050609_03_F06, Mouse strain C57BL/6J (56 days, male) 0.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo