HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:16.1 nTPM
HPA Brain:40.9 nTPM
GTEx:16.1 nTPM
FANTOM5:76.1 Scaled Tags Per Million
Pig:28.5 nTPM
Mouse:37.7 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052103Antibody HPA067418
Glial cells MediumLow
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 40.9
Sample id Sample description nTPM
Hippocampus
nTPM: 39.0
1898 Male, age 80, left hemisphere 40.8
2529 Female, age 94, left hemisphere 40.7
1911 Female, age 85, right hemisphere 39.7
2148 Female, age 91, left hemisphere 39.3
1855 Male, age 76, left hemisphere 38.9
2621 Female, age 67, right hemisphere 34.3
Dentate gyrus
nTPM: 36.3
1927 Female, age 91, both hemispheres 39.7
2528 Male, age 74, both hemispheres 39.0
2010 Male, age 76, both hemispheres 37.2
2246 Female, age 85, both hemispheres 35.7
2530 Female, age 94, left hemisphere 34.7
2531 Female, age 67, both hemispheres 31.3
Entorhinal gyrus
nTPM: 40.2
2764 Male, age 80, right hemisphere 43.8
2117 Female, age 91, right hemisphere 43.2
1938 Female, age 85, left hemisphere 39.9
2686 Male, age 75, right hemisphere 39.9
2613 Female, age 94, left hemisphere 38.1
1787 Male, age 76, left hemisphere 36.5
Hippocampus, CA1
nTPM: 40.9
2749 Male, age 80, left hemisphere 54.5
2527 Male, age 74, both hemispheres 40.7
1873 Female, age 85, both hemispheres 40.1
2082 Female, age 91, right hemisphere 38.4
2045 Male, age 76, both hemispheres 30.7
Hippocampus, CA2
nTPM: 39.8
1963 Male, age 80, left hemisphere 48.6
1892 Male, age 76, both hemispheres 40.1
2113 Female, age 91, right hemisphere 39.7
2249 Male, age 74, both hemispheres 37.9
1940 Female, age 85, left hemisphere 37.0
2437 Female, age 94, left hemisphere 35.4
Hippocampus, CA3
nTPM: 37.6
2137 Male, age 80, left hemisphere 50.5
1891 Female, age 85, both hemispheres 38.2
1867 Male, age 76, both hemispheres 37.1
2861 Female, age 67, both hemispheres 34.3
2620 Female, age 94, left hemisphere 33.2
2436 Male, age 74, both hemispheres 32.6
Parahippocampal cortex
nTPM: 39.0
1850 Male, age 80, both hemispheres 43.2
2692 Male, age 74, both hemispheres 41.3
1933 Female, age 85, both hemispheres 41.0
2245 Female, age 91, both hemispheres 39.9
1990 Female, age 91, right hemisphere 39.6
2532 Female, age 72, left hemisphere 39.1
2693 Female, age 94, both hemispheres 37.9
2622 Female, age 67, right hemisphere 36.9
2018 Male, age 76, both hemispheres 35.7
2250 Female, age 67, right hemisphere 35.4
Perirhinal gyrus
nTPM: 40.0
1847 Female, age 91, left hemisphere 43.2
1794 Male, age 80, right hemisphere 41.0
2848 Male, age 76, right hemisphere 39.2
2521 Female, age 94, right hemisphere 38.3
1841 Female, age 85, right hemisphere 38.2
Subiculum
nTPM: 39.6
1901 Male, age 80, both hemispheres 42.1
2619 Male, age 74, both hemispheres 40.8
1977 Female, age 85, both hemispheres 40.5
2729 Female, age 91, right hemisphere 39.5
2042 Male, age 76, both hemispheres 37.7
2438 Female, age 94, left hemisphere 36.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.1
Samples: 197

Max nTPM: 23.8
Min nTPM: 7.5
Std nTPM: 2.7
Median nTPM: 16.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 23.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 22.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 21.9
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 21.6
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 21.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 21.4
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 21.3
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 21.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 20.9
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 20.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 20.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 76.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.1
FF:10169-103B7 60 years, female 85.1
FF:10153-102I9 76 years, female 67.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 28.5
Pig sample Sample description nTPM
Subiculum
nTPM: 28.5
Samples: 4

Max nTPM: 32.2
Min nTPM: 24.8
Sample A Female 32.2
Sample B Female 29.2
Sample C Male 27.9
Sample D Male 24.8
Dorsal hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 28.7
Min nTPM: 19.1
Sample A Female 28.7
Sample B Female 25.7
Sample C Male 25.7
Sample D Male 19.1
Entorhinal cortex
nTPM: 25.9
Samples: 4

Max nTPM: 28.1
Min nTPM: 23.2
Sample A Female 25.6
Sample B Female 26.7
Sample C Male 28.1
Sample D Male 23.2
Ventral hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 29.6
Min nTPM: 23.4
Sample A Female 25.2
Sample B Female 23.4
Sample C Male 29.6
Sample D Male 25.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 37.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.0
Samples: 4

Max nTPM: 39.1
Min nTPM: 30.8
Sample A Male 38.6
Sample B Male 35.4
Sample C Female 39.1
Sample D Female 30.8
Hippocampal formation
nTPM: 37.7
Samples: 4

Max nTPM: 40.8
Min nTPM: 35.5
Sample A Male 35.5
Sample B Male 36.9
Sample C Female 40.8
Sample D Female 37.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
70218085 Antisense, RP_050519_02_G08, Mouse strain C57BL/6J (56 days, male) 6.0

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