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  • SUMMARY

  • TISSUE

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  • CRTAC1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:10.5 nTPM
HPA Brain:19.2 nTPM
GTEx:10.5 nTPM
Pig:11.7 nTPM
Mouse:33.9 nTPM
Allen mouse:2.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 13.5
2226 Male, age 75, left hemisphere 14.0
1961 Female, age 42, unknown 12.9
Dorsomedial nucleus
nTPM: 16.9
1989 Male, age 62, unknown 31.6
2017 Female, age 42, unknown 9.6
2041 Female, age 72, unknown 9.6
Lateral hypothalamic area
nTPM: 19.2
2228 Male, age 66, unknown 31.0
1791 Male, age 80, right hemisphere 18.0
2271 Male, age 75, both hemispheres 17.4
2412 Male, age 62, unknown 10.3
Mammillary body
nTPM: 11.4
2413 Male, age 66, unknown 17.5
1923 Female, age 72, unknown 15.1
1834 Female, age 42, unknown 8.9
1945 Male, age 80, right hemisphere 8.0
1948 Female, age 72, unknown 7.7
Paraventricular nucleus
nTPM: 11.4
2700 Male, age 62, unknown 11.4
Preoptic area
nTPM: 11.3
1907 Male, age 80, right hemisphere 14.6
2414 Female, age 72, unknown 10.6
1861 Female, age 42, unknown 8.7
Supraoptic nucleus
nTPM: 11.1
1894 Female, age 72, unknown 14.4
2043 Male, age 62, unknown 10.3
2835 Female, age 72, unknown 8.7
Ventromedial nucleus
nTPM: 10.6
1982 Female, age 72, unknown 12.2
1822 Female, age 42, unknown 9.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 10.5
Samples: 257

Max nTPM: 37.5
Min nTPM: 1.9
Std nTPM: 5.4
Median nTPM: 9.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 37.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 32.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 29.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 28.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 28.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 28.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 26.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 24.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 23.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 23.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 23.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 21.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 20.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 20.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 19.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 19.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 18.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 18.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 18.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 17.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 17.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 17.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 17.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 17.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 16.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 16.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 16.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 16.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 16.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 15.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 15.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 15.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 15.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 15.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 15.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 15.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 15.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 14.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 14.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 14.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 14.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 14.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 14.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 14.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 14.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 14.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 14.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 14.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 14.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 13.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 13.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 13.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 13.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 13.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 13.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 13.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 13.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 13.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 13.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 13.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 13.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 12.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 12.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 12.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 12.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 12.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 12.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 12.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 12.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 12.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 12.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 12.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 12.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 12.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 12.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 12.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 12.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 12.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 12.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 12.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 12.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 12.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 11.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 11.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 11.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 11.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 11.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 11.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 11.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 11.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 11.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 11.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 11.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 11.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 11.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 11.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 11.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 11.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 11.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 10.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 10.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 10.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 10.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 10.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 10.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 10.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 10.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 10.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 10.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 10.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 10.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 10.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 10.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 10.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 10.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 10.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 10.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 10.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 10.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 10.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 10.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 9.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 9.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 9.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 9.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 9.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 9.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 9.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 9.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 9.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 9.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 9.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 9.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 9.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 9.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 9.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 9.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 9.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 9.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 9.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 9.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 9.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 8.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 8.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 8.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 8.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 8.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 8.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 8.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 8.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 8.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 8.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 8.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 8.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 8.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 8.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 8.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 8.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 8.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 8.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 8.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 8.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 7.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 7.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 7.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 7.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 7.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 7.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 7.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 7.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 7.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 7.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 7.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 7.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 7.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 7.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 7.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 7.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 7.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 7.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 7.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 7.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 7.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 7.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 7.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 7.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 7.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 7.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 7.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 7.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 6.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 6.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 6.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 6.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 6.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 6.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 6.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 6.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 6.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 6.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 6.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 6.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 6.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 6.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 6.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 6.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 6.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 6.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 6.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 6.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 6.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 6.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 6.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 6.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 5.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 5.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 5.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 5.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 5.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 5.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 5.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 5.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 5.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 5.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 5.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 5.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 5.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 5.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 5.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 5.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 5.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 5.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 5.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 4.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 4.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 4.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 4.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 4.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 4.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 4.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 4.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 4.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 4.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 3.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 3.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 3.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 3.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 3.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 3.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 3.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 2.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 2.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 2.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 2.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 2.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 2.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 1.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 11.7
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.4
Sample A Female 11.8
Sample B Female 13.2
Sample C Male 11.3
Sample D Male 10.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 33.9
Samples: 4

Max nTPM: 38.5
Min nTPM: 27.7
Sample A Male 38.5
Sample B Male 37.6
Sample C Female 31.9
Sample D Female 27.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.2
75749739 Antisense, RP_060518_02_E07, Mouse strain C57BL/6J (56 days, male) 2.3
69173998 Antisense, RP_050329_01_G04, Mouse strain C57BL/6J (56 days, male) 2.1

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