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  • NDUFB7
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:225.6 nTPM
HPA Brain:166.6 nTPM
GTEx:225.6 nTPM
FANTOM5:61.7 Scaled Tags Per Million
Pig:142.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

166.6
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 166.6
1981 Female, age 72, midline 200.9
2194 Female, age 79, both hemispheres 188.8
2565 Male, age 75, midline 172.7
2816 Male, age 47, midline 150.3
2048 Male, age 55, midline 120.0
Cervical spinal cord, dorsal horn
nTPM: 159.4
2173 Female, age 72, unknown 200.5
2296 Male, age 66, both hemispheres 179.5
2069 Male, age 47, both hemispheres 164.4
1877 Male, age 55, unknown 141.9
2721 Male, age 90, both hemispheres 135.8
2297 Male, age 75, both hemispheres 134.1
Cervical spinal cord, ventral horn
nTPM: 166.0
2480 Male, age 75, both hemispheres 192.3
2098 Female, age 72, unknown 176.2
2068 Male, age 55, unknown 174.2
2809 Male, age 90, both hemispheres 165.7
2295 Male, age 66, both hemispheres 150.9
2820 Female, age 79, both hemispheres 136.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

225.6
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 225.6
Samples: 204

Max nTPM: 442.7
Min nTPM: 109.3
Std nTPM: 57.2
Median nTPM: 216.2
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 442.7
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 423.2
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 410.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 379.3
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 377.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 370.3
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 361.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 359.5
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 343.8
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 343.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 339.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 337.0
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 333.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 320.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 319.6
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 312.6
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 303.1
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 301.0
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 297.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 297.8
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 296.8
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 295.8
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 295.5
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 294.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 291.1
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 290.2
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 287.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 284.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 282.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 279.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 270.8
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 270.7
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 269.5
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 268.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 268.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 267.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 267.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 266.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 265.9
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 263.8
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 263.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 262.0
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 261.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 260.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 258.9
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 258.1
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 257.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 256.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 256.4
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 256.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 254.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 252.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 250.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 248.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 247.4
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 247.1
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 247.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 246.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 245.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 245.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 245.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 244.8
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 243.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 243.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 241.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 241.0
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 241.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 240.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 239.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 239.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 238.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 237.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 237.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 237.3
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 237.0
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 236.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 236.8
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 236.0
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 235.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 235.8
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 235.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 234.5
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 234.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 234.1
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 233.2
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 231.2
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 231.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 230.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 228.9
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 228.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 228.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 227.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 226.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 226.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 225.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 224.6
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 220.1
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 219.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 219.9
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 219.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 218.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 216.3
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 216.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 215.6
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 215.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 215.0
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 214.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 214.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 214.0
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 213.3
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 213.1
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 211.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 211.3
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 211.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 211.1
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 209.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 208.9
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 208.6
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 208.0
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 207.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 206.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 206.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 205.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 205.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 205.1
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 204.2
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 203.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 203.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 203.5
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 202.9
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 201.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 201.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 198.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 196.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 196.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 196.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 195.9
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 195.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 195.5
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 195.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 195.2
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 194.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 191.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 190.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 189.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 189.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 188.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 188.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 186.9
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 186.9
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 186.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 185.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 185.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 184.9
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 184.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 184.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 183.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 183.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 181.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 181.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 181.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 180.1
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 179.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 178.4
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 178.1
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 177.7
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 177.5
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 177.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 176.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 176.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 175.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 174.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 174.4
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 172.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 170.3
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 169.9
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 169.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 168.8
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 167.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 167.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 167.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 165.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 164.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 164.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 163.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 162.8
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 162.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 159.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 159.0
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 158.6
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 157.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 154.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 152.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 151.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 151.0
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 139.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 135.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 135.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 131.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 130.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 128.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 125.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 116.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 109.3
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

61.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 61.7
FF:10181-103D1 60 years, female 74.1
FF:10159-103A6 76 years, female 49.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

142.8
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 116.8
Samples: 4

Max nTPM: 131.9
Min nTPM: 96.2
Sample A Female 118.8
Sample B Female 120.3
Sample C Male 131.9
Sample D Male 96.2
Ventral spinal cord
nTPM: 142.8
Samples: 4

Max nTPM: 171.3
Min nTPM: 106.0
Sample A Female 134.3
Sample B Female 171.3
Sample C Male 159.4
Sample D Male 106.0

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