HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:70.7 nTPM
HPA Brain:150.2 nTPM
GTEx:70.7 nTPM
FANTOM5:17.7 Scaled Tags Per Million
Pig:52.7 nTPM
Mouse:48.2 nTPM
Allen mouse:2.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 150.2
Sample id Sample description nTPM
Hippocampus
nTPM: 150.2
2621 Female, age 67, right hemisphere 203.1
2529 Female, age 94, left hemisphere 198.3
2148 Female, age 91, left hemisphere 146.0
1911 Female, age 85, right hemisphere 129.5
1898 Male, age 80, left hemisphere 122.9
1855 Male, age 76, left hemisphere 101.6
Dentate gyrus
nTPM: 128.5
2530 Female, age 94, left hemisphere 172.6
2531 Female, age 67, both hemispheres 158.3
1927 Female, age 91, both hemispheres 145.4
2010 Male, age 76, both hemispheres 113.6
2528 Male, age 74, both hemispheres 96.9
2246 Female, age 85, both hemispheres 84.1
Entorhinal gyrus
nTPM: 112.2
2117 Female, age 91, right hemisphere 128.4
2613 Female, age 94, left hemisphere 127.9
2764 Male, age 80, right hemisphere 118.0
1787 Male, age 76, left hemisphere 109.3
2686 Male, age 75, right hemisphere 104.3
1938 Female, age 85, left hemisphere 85.4
Hippocampus, CA1
nTPM: 113.6
2749 Male, age 80, left hemisphere 151.2
2527 Male, age 74, both hemispheres 139.9
1873 Female, age 85, both hemispheres 104.9
2082 Female, age 91, right hemisphere 104.0
2045 Male, age 76, both hemispheres 68.0
Hippocampus, CA2
nTPM: 136.4
1963 Male, age 80, left hemisphere 177.0
2437 Female, age 94, left hemisphere 176.5
1892 Male, age 76, both hemispheres 140.5
2249 Male, age 74, both hemispheres 120.0
2113 Female, age 91, right hemisphere 113.0
1940 Female, age 85, left hemisphere 91.8
Hippocampus, CA3
nTPM: 127.4
2861 Female, age 67, both hemispheres 159.5
1867 Male, age 76, both hemispheres 144.6
2137 Male, age 80, left hemisphere 140.0
2620 Female, age 94, left hemisphere 138.9
1891 Female, age 85, both hemispheres 102.2
2436 Male, age 74, both hemispheres 78.9
Parahippocampal cortex
nTPM: 107.3
2245 Female, age 91, both hemispheres 157.6
2622 Female, age 67, right hemisphere 125.2
1990 Female, age 91, right hemisphere 119.8
2250 Female, age 67, right hemisphere 117.4
2018 Male, age 76, both hemispheres 108.3
2532 Female, age 72, left hemisphere 101.5
2693 Female, age 94, both hemispheres 93.0
2692 Male, age 74, both hemispheres 91.0
1933 Female, age 85, both hemispheres 81.8
1850 Male, age 80, both hemispheres 76.9
Perirhinal gyrus
nTPM: 92.8
2521 Female, age 94, right hemisphere 123.4
1847 Female, age 91, left hemisphere 103.9
1794 Male, age 80, right hemisphere 88.9
2848 Male, age 76, right hemisphere 74.2
1841 Female, age 85, right hemisphere 73.4
Subiculum
nTPM: 120.2
2438 Female, age 94, left hemisphere 138.1
1901 Male, age 80, both hemispheres 129.0
2619 Male, age 74, both hemispheres 122.2
2729 Female, age 91, right hemisphere 111.6
1977 Female, age 85, both hemispheres 110.5
2042 Male, age 76, both hemispheres 110.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 70.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.7
Samples: 255

Max nTPM: 224.0
Min nTPM: 14.1
Std nTPM: 31.5
Median nTPM: 63.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 224.0
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 213.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 172.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 151.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 147.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 146.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 146.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 144.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 134.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 129.6
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 128.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.7
FF:10153-102I9 76 years, female 21.0
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 52.7
Pig sample Sample description nTPM
Subiculum
nTPM: 36.6
Samples: 4

Max nTPM: 50.2
Min nTPM: 27.9
Sample A Female 50.2
Sample B Female 29.5
Sample C Male 38.7
Sample D Male 27.9
Dorsal hippocampus
nTPM: 50.1
Samples: 4

Max nTPM: 62.3
Min nTPM: 32.2
Sample A Female 60.1
Sample B Female 45.7
Sample C Male 62.3
Sample D Male 32.2
Entorhinal cortex
nTPM: 52.7
Samples: 4

Max nTPM: 56.4
Min nTPM: 48.4
Sample A Female 50.5
Sample B Female 55.3
Sample C Male 56.4
Sample D Male 48.4
Ventral hippocampus
nTPM: 46.9
Samples: 4

Max nTPM: 61.0
Min nTPM: 28.9
Sample A Female 43.5
Sample B Female 28.9
Sample C Male 61.0
Sample D Male 54.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 48.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.6
Samples: 4

Max nTPM: 55.7
Min nTPM: 41.7
Sample A Male 55.7
Sample B Male 47.3
Sample C Female 41.7
Sample D Female 41.7
Hippocampal formation
nTPM: 48.2
Samples: 4

Max nTPM: 52.1
Min nTPM: 43.7
Sample A Male 43.7
Sample B Male 49.8
Sample C Female 52.1
Sample D Female 47.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
70723465 Antisense, RP_050705_01_B04, Mouse strain C57BL/6J (56 days, male) 2.0
73512185 Antisense, RP_050705_01_B04, Mouse strain C57BL/6J (56 days, male) 1.5

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