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  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:104.7 nTPM
HPA Brain:193.8 nTPM
GTEx:104.7 nTPM
Pig:149.9 nTPM
Mouse:122.6 nTPM
Allen mouse:17.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 114.7
2226 Male, age 75, left hemisphere 119.6
1961 Female, age 42, unknown 109.8
Dorsomedial nucleus
nTPM: 125.4
2041 Female, age 72, unknown 142.6
2017 Female, age 42, unknown 121.1
1989 Male, age 62, unknown 112.5
Lateral hypothalamic area
nTPM: 147.3
2228 Male, age 66, unknown 180.3
1791 Male, age 80, right hemisphere 149.0
2271 Male, age 75, both hemispheres 132.6
2412 Male, age 62, unknown 127.2
Mammillary body
nTPM: 157.8
1948 Female, age 72, unknown 171.6
1945 Male, age 80, right hemisphere 164.4
1923 Female, age 72, unknown 161.7
1834 Female, age 42, unknown 156.2
2413 Male, age 66, unknown 135.1
Paraventricular nucleus
nTPM: 170.2
2700 Male, age 62, unknown 170.2
Preoptic area
nTPM: 145.9
1861 Female, age 42, unknown 157.1
2414 Female, age 72, unknown 152.1
1907 Male, age 80, right hemisphere 128.7
Supraoptic nucleus
nTPM: 193.8
1894 Female, age 72, unknown 220.5
2043 Male, age 62, unknown 205.6
2835 Female, age 72, unknown 155.4
Ventromedial nucleus
nTPM: 120.9
1982 Female, age 72, unknown 121.4
1822 Female, age 42, unknown 120.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 104.7
Samples: 257

Max nTPM: 231.8
Min nTPM: 65.1
Std nTPM: 27.4
Median nTPM: 98.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 231.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 230.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 210.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 208.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 191.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 191.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 186.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 183.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 175.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 168.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 165.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 161.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 160.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 158.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 154.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 152.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 150.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 149.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 149.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 148.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 145.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 145.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 141.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 138.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 137.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 136.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 135.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 135.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 134.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 133.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 131.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 129.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 128.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 128.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 128.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 128.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 127.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 126.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 124.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 123.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 122.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 122.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 122.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 121.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 121.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 121.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 120.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 120.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 120.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 120.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 119.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 118.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 118.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 118.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 117.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 117.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 116.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 116.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 116.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 116.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 115.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 115.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 115.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 115.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 115.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 114.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 114.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 113.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 113.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 113.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 112.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 111.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 111.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 111.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 110.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 110.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 110.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 109.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 109.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 109.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 109.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 109.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 108.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 108.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 108.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 108.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 108.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 107.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 106.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 106.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 106.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 106.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 105.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 105.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 105.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 105.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 105.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 105.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 105.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 104.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 104.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 104.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 104.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 103.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 103.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 103.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 103.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 103.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 102.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 102.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 102.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 102.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 101.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 101.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 101.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 101.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 100.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 100.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 100.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 100.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 100.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 100.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 100.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 99.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 99.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 99.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 98.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 98.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 98.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 98.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 98.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 98.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 97.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 97.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 97.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 97.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 97.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 97.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 96.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 96.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 96.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 95.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 95.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 95.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 95.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 95.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 95.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 95.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 94.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 94.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 94.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 94.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 93.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 93.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 93.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 93.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 93.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 93.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 93.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 92.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 92.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 92.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 92.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 92.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 92.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 91.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 91.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 91.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 91.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 90.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 90.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 90.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 90.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 90.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 90.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 89.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 89.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 89.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 89.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 89.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 88.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 88.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 88.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 88.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 88.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 88.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 88.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 88.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 88.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 88.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 87.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 87.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 87.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 87.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 87.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 86.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 86.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 86.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 85.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 85.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 85.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 85.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 85.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 84.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 84.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 84.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 84.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 84.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 84.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 84.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 83.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 83.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 83.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 83.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 83.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 82.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 82.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 81.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 81.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 81.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 81.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 81.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 80.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 80.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 80.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 80.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 80.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 80.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 80.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 79.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 79.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 78.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 78.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 77.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 77.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 77.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 76.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 76.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 76.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 76.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 75.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 74.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 74.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 74.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 73.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 73.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 73.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 72.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 71.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 70.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 70.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 69.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 68.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 68.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 66.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 66.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 65.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

149.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 149.9
Samples: 4

Max nTPM: 182.5
Min nTPM: 116.4
Sample A Female 182.5
Sample B Female 156.5
Sample C Male 144.1
Sample D Male 116.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 122.6
Samples: 4

Max nTPM: 137.2
Min nTPM: 114.2
Sample A Male 114.2
Sample B Male 116.2
Sample C Female 137.2
Sample D Female 122.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 17.9
532638 Antisense, RP_040810_02_H01, Mouse strain C57BL/6J (56 days, male) 17.9

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