HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:21.9 nTPM
HPA Brain:51.5 nTPM
GTEx:21.9 nTPM
FANTOM5:44.3 Scaled Tags Per Million
Pig:20.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004144
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 51.5
Sample id Sample description nTPM
Hippocampus
nTPM: 47.3
2529 Female, age 94, left hemisphere 57.3
2621 Female, age 67, right hemisphere 47.2
1855 Male, age 76, left hemisphere 45.7
2148 Female, age 91, left hemisphere 45.7
1911 Female, age 85, right hemisphere 44.7
1898 Male, age 80, left hemisphere 43.2
Dentate gyrus
nTPM: 48.4
2530 Female, age 94, left hemisphere 56.8
2531 Female, age 67, both hemispheres 53.8
2246 Female, age 85, both hemispheres 47.9
1927 Female, age 91, both hemispheres 46.3
2528 Male, age 74, both hemispheres 44.8
2010 Male, age 76, both hemispheres 40.9
Entorhinal gyrus
nTPM: 46.9
2686 Male, age 75, right hemisphere 54.0
1787 Male, age 76, left hemisphere 47.5
2764 Male, age 80, right hemisphere 46.5
1938 Female, age 85, left hemisphere 45.6
2117 Female, age 91, right hemisphere 45.0
2613 Female, age 94, left hemisphere 42.7
Hippocampus, CA1
nTPM: 45.5
2082 Female, age 91, right hemisphere 53.2
2527 Male, age 74, both hemispheres 46.3
1873 Female, age 85, both hemispheres 44.7
2045 Male, age 76, both hemispheres 42.7
2749 Male, age 80, left hemisphere 40.8
Hippocampus, CA2
nTPM: 45.6
2437 Female, age 94, left hemisphere 49.0
1940 Female, age 85, left hemisphere 48.9
2249 Male, age 74, both hemispheres 46.1
2113 Female, age 91, right hemisphere 45.7
1892 Male, age 76, both hemispheres 42.9
1963 Male, age 80, left hemisphere 41.3
Hippocampus, CA3
nTPM: 46.8
2436 Male, age 74, both hemispheres 51.6
2861 Female, age 67, both hemispheres 50.2
1891 Female, age 85, both hemispheres 46.3
2137 Male, age 80, left hemisphere 46.3
1867 Male, age 76, both hemispheres 45.6
2620 Female, age 94, left hemisphere 40.9
Parahippocampal cortex
nTPM: 48.6
2692 Male, age 74, both hemispheres 52.8
1933 Female, age 85, both hemispheres 52.5
2532 Female, age 72, left hemisphere 52.1
2018 Male, age 76, both hemispheres 50.5
1850 Male, age 80, both hemispheres 48.9
2245 Female, age 91, both hemispheres 48.1
2250 Female, age 67, right hemisphere 47.4
2622 Female, age 67, right hemisphere 45.5
1990 Female, age 91, right hemisphere 44.6
2693 Female, age 94, both hemispheres 43.3
Perirhinal gyrus
nTPM: 50.7
1841 Female, age 85, right hemisphere 53.9
1847 Female, age 91, left hemisphere 52.1
2848 Male, age 76, right hemisphere 51.3
1794 Male, age 80, right hemisphere 50.8
2521 Female, age 94, right hemisphere 45.6
Subiculum
nTPM: 51.5
2438 Female, age 94, left hemisphere 82.5
2619 Male, age 74, both hemispheres 48.0
1977 Female, age 85, both hemispheres 47.8
2042 Male, age 76, both hemispheres 44.1
1901 Male, age 80, both hemispheres 43.7
2729 Female, age 91, right hemisphere 42.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 21.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.9
Samples: 255

Max nTPM: 42.6
Min nTPM: 12.7
Std nTPM: 4.1
Median nTPM: 21.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 42.6
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 39.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 36.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 33.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 33.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 32.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 31.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 30.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 30.8
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 30.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 30.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 44.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.3
FF:10153-102I9 76 years, female 45.1
FF:10169-103B7 60 years, female 43.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 20.3
Pig sample Sample description nTPM
Subiculum
nTPM: 18.9
Samples: 4

Max nTPM: 21.1
Min nTPM: 17.5
Sample A Female 21.1
Sample B Female 17.9
Sample C Male 18.9
Sample D Male 17.5
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 20.2
Min nTPM: 17.1
Sample A Female 19.7
Sample B Female 20.2
Sample C Male 17.1
Sample D Male 18.4
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 17.7
Min nTPM: 16.4
Sample A Female 17.3
Sample B Female 17.7
Sample C Male 16.4
Sample D Male 16.4
Ventral hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 24.2
Min nTPM: 16.7
Sample A Female 18.2
Sample B Female 16.7
Sample C Male 24.2
Sample D Male 22.1

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