HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:57.0 nTPM
HPA Brain:40.6 nTPM
GTEx:57.0 nTPM
FANTOM5:102.4 Scaled Tags Per Million
Pig:20.5 nTPM
Mouse:16.0 nTPM
Allen mouse:1.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029207Antibody CAB003815
Glial cells Not detectedNot detected
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 40.6
Sample id Sample description nTPM
Hippocampus
nTPM: 39.0
2529 Female, age 94, left hemisphere 46.8
1855 Male, age 76, left hemisphere 43.8
1898 Male, age 80, left hemisphere 39.4
2621 Female, age 67, right hemisphere 38.6
1911 Female, age 85, right hemisphere 36.0
2148 Female, age 91, left hemisphere 29.3
Dentate gyrus
nTPM: 36.9
2530 Female, age 94, left hemisphere 45.6
2010 Male, age 76, both hemispheres 44.9
2531 Female, age 67, both hemispheres 34.8
2246 Female, age 85, both hemispheres 34.2
2528 Male, age 74, both hemispheres 33.2
1927 Female, age 91, both hemispheres 28.7
Entorhinal gyrus
nTPM: 34.2
2117 Female, age 91, right hemisphere 43.0
1787 Male, age 76, left hemisphere 36.2
1938 Female, age 85, left hemisphere 34.8
2686 Male, age 75, right hemisphere 32.4
2764 Male, age 80, right hemisphere 31.0
2613 Female, age 94, left hemisphere 27.8
Hippocampus, CA1
nTPM: 31.5
2527 Male, age 74, both hemispheres 37.5
1873 Female, age 85, both hemispheres 32.6
2045 Male, age 76, both hemispheres 32.4
2082 Female, age 91, right hemisphere 29.7
2749 Male, age 80, left hemisphere 25.2
Hippocampus, CA2
nTPM: 37.3
2437 Female, age 94, left hemisphere 46.2
1940 Female, age 85, left hemisphere 42.5
1963 Male, age 80, left hemisphere 41.4
2249 Male, age 74, both hemispheres 34.9
2113 Female, age 91, right hemisphere 33.0
1892 Male, age 76, both hemispheres 25.8
Hippocampus, CA3
nTPM: 34.1
2861 Female, age 67, both hemispheres 49.2
1891 Female, age 85, both hemispheres 40.2
2436 Male, age 74, both hemispheres 38.7
1867 Male, age 76, both hemispheres 32.5
2137 Male, age 80, left hemisphere 24.0
2620 Female, age 94, left hemisphere 20.0
Parahippocampal cortex
nTPM: 34.8
2018 Male, age 76, both hemispheres 52.2
1990 Female, age 91, right hemisphere 39.3
2245 Female, age 91, both hemispheres 36.0
1933 Female, age 85, both hemispheres 34.3
2250 Female, age 67, right hemisphere 32.4
2692 Male, age 74, both hemispheres 31.8
2532 Female, age 72, left hemisphere 30.8
2693 Female, age 94, both hemispheres 30.8
2622 Female, age 67, right hemisphere 30.1
1850 Male, age 80, both hemispheres 29.9
Perirhinal gyrus
nTPM: 30.0
2521 Female, age 94, right hemisphere 34.7
1841 Female, age 85, right hemisphere 33.7
2848 Male, age 76, right hemisphere 28.8
1847 Female, age 91, left hemisphere 26.7
1794 Male, age 80, right hemisphere 26.4
Subiculum
nTPM: 40.6
2042 Male, age 76, both hemispheres 59.6
2438 Female, age 94, left hemisphere 41.3
1977 Female, age 85, both hemispheres 39.0
2619 Male, age 74, both hemispheres 35.3
2729 Female, age 91, right hemisphere 34.3
1901 Male, age 80, both hemispheres 34.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 57.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.0
Samples: 255

Max nTPM: 220.5
Min nTPM: 18.2
Std nTPM: 32.9
Median nTPM: 50.4
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 220.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 215.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 203.4
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 195.1
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 178.1
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 147.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 142.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 132.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 132.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 132.1
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 127.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 102.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 102.4
FF:10153-102I9 76 years, female 117.6
FF:10169-103B7 60 years, female 87.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 20.5
Pig sample Sample description nTPM
Subiculum
nTPM: 17.3
Samples: 4

Max nTPM: 18.4
Min nTPM: 15.3
Sample A Female 15.3
Sample B Female 17.2
Sample C Male 18.4
Sample D Male 18.4
Dorsal hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 22.5
Min nTPM: 16.6
Sample A Female 17.7
Sample B Female 19.3
Sample C Male 22.5
Sample D Male 16.6
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 20.8
Min nTPM: 11.3
Sample A Female 14.2
Sample B Female 20.8
Sample C Male 20.6
Sample D Male 11.3
Ventral hippocampus
nTPM: 20.5
Samples: 4

Max nTPM: 29.5
Min nTPM: 16.9
Sample A Female 17.0
Sample B Female 18.7
Sample C Male 29.5
Sample D Male 16.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 16.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 17.6
Min nTPM: 12.8
Sample A Male 12.8
Sample B Male 15.6
Sample C Female 15.2
Sample D Female 17.6
Hippocampal formation
nTPM: 16.0
Samples: 4

Max nTPM: 21.8
Min nTPM: 13.2
Sample A Male 13.2
Sample B Male 15.3
Sample C Female 13.8
Sample D Female 21.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69782222 Antisense, RP_050505_02_E10, Mouse strain C57BL/6J (56 days, male) 1.3

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