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  • TISSUE

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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:65.3 nTPM
HPA Brain:136.0 nTPM
GTEx:65.3 nTPM
Pig:184.4 nTPM
Mouse:95.2 nTPM
Allen mouse:5.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 75.9
1961 Female, age 42, unknown 85.3
2226 Male, age 75, left hemisphere 66.5
Dorsomedial nucleus
nTPM: 109.6
2041 Female, age 72, unknown 144.0
1989 Male, age 62, unknown 102.6
2017 Female, age 42, unknown 82.2
Lateral hypothalamic area
nTPM: 73.0
2271 Male, age 75, both hemispheres 105.6
1791 Male, age 80, right hemisphere 89.0
2412 Male, age 62, unknown 55.6
2228 Male, age 66, unknown 41.8
Mammillary body
nTPM: 78.3
1834 Female, age 42, unknown 108.1
1945 Male, age 80, right hemisphere 86.4
2413 Male, age 66, unknown 76.5
1923 Female, age 72, unknown 68.5
1948 Female, age 72, unknown 52.0
Paraventricular nucleus
nTPM: 55.3
2700 Male, age 62, unknown 55.3
Preoptic area
nTPM: 61.6
1861 Female, age 42, unknown 72.8
2414 Female, age 72, unknown 60.8
1907 Male, age 80, right hemisphere 51.1
Supraoptic nucleus
nTPM: 136.0
1894 Female, age 72, unknown 172.6
2043 Male, age 62, unknown 168.9
2835 Female, age 72, unknown 66.7
Ventromedial nucleus
nTPM: 95.7
1822 Female, age 42, unknown 125.5
1982 Female, age 72, unknown 66.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 65.3
Samples: 257

Max nTPM: 226.3
Min nTPM: 8.3
Std nTPM: 39.2
Median nTPM: 53.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 226.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 225.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 208.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 200.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 188.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 182.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 178.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 178.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 164.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 162.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 161.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 159.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 158.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 156.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 152.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 148.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 143.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 140.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 138.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 127.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 125.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 124.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 123.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 123.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 121.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 119.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 117.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 116.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 115.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 112.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 111.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 109.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 109.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 108.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 106.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 106.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 102.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 101.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 100.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 99.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 97.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 97.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 95.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 93.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 93.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 93.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 88.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 87.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 86.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 86.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 85.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 84.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 84.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 81.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 81.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 80.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 79.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 79.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 78.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 77.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 77.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 77.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 76.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 76.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 75.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 75.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 75.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 74.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 73.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 73.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 72.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 71.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 71.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 71.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 71.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 70.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 69.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 68.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 68.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 68.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 67.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 67.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 67.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 66.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 66.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 66.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 65.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 65.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 65.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 65.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 65.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 65.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 64.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 62.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 62.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 62.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 61.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 61.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 61.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 60.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 59.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 59.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 59.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 59.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 58.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 57.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 57.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 57.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 57.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 57.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 57.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 57.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 57.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 56.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 56.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 56.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 56.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 56.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 56.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 55.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 55.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 55.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 54.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 54.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 54.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 54.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 54.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 54.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 53.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 53.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 53.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 53.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 53.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 53.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 52.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 52.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 52.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 52.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 51.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 51.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 51.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 51.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 51.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 50.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 50.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 50.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 49.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 49.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 49.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 49.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 49.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 49.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 49.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 49.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 48.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 48.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 48.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 47.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 47.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 47.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 47.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 46.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 46.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 46.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 45.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 45.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 45.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 45.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 45.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 45.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 45.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 45.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 45.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 44.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 44.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 44.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 43.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 43.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 43.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 43.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 43.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 43.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 43.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 42.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 42.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 42.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 42.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 42.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 42.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 41.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 41.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 41.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 41.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 41.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 40.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 40.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 40.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 39.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 38.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 38.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 38.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 38.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 38.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 37.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 37.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 37.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 37.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 37.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 37.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 37.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 37.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 36.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 36.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 36.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 36.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 36.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 36.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 36.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 34.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 34.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 34.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 33.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 33.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 33.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 32.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 32.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 32.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 31.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 31.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 31.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 31.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 31.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 30.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 30.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 30.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 29.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 28.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 27.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 27.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 27.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 26.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 26.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 25.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 25.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 24.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 23.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 23.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 22.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 21.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 21.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 20.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 19.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 17.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 15.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 15.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 14.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 8.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 184.4
Samples: 4

Max nTPM: 214.8
Min nTPM: 137.7
Sample A Female 214.8
Sample B Female 176.7
Sample C Male 208.5
Sample D Male 137.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 95.2
Samples: 4

Max nTPM: 111.0
Min nTPM: 78.6
Sample A Male 100.3
Sample B Male 111.0
Sample C Female 78.6
Sample D Female 90.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.3
74581394 Antisense, RP_060117_02_C03, Mouse strain C57BL/6J (56 days, male) 8.3
68269057 Antisense, RP_041208_01_G08, Mouse strain C57BL/6J (56 days, male) 2.3

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