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  • NDRG3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:52.9 nTPM
HPA Brain:90.7 nTPM
GTEx:52.9 nTPM
Pig:144.1 nTPM
Mouse:250.8 nTPM
Allen mouse:3.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 66.0
2226 Male, age 75, left hemisphere 80.0
1961 Female, age 42, unknown 51.9
Dorsomedial nucleus
nTPM: 64.5
1989 Male, age 62, unknown 88.9
2041 Female, age 72, unknown 53.0
2017 Female, age 42, unknown 51.7
Lateral hypothalamic area
nTPM: 83.8
2228 Male, age 66, unknown 98.5
2271 Male, age 75, both hemispheres 89.3
1791 Male, age 80, right hemisphere 85.3
2412 Male, age 62, unknown 62.4
Mammillary body
nTPM: 90.7
1923 Female, age 72, unknown 138.3
2413 Male, age 66, unknown 85.4
1948 Female, age 72, unknown 84.5
1834 Female, age 42, unknown 80.4
1945 Male, age 80, right hemisphere 64.7
Paraventricular nucleus
nTPM: 58.0
2700 Male, age 62, unknown 58.0
Preoptic area
nTPM: 66.2
1907 Male, age 80, right hemisphere 76.1
1861 Female, age 42, unknown 63.9
2414 Female, age 72, unknown 58.6
Supraoptic nucleus
nTPM: 56.0
2835 Female, age 72, unknown 62.6
1894 Female, age 72, unknown 60.1
2043 Male, age 62, unknown 45.2
Ventromedial nucleus
nTPM: 63.2
1982 Female, age 72, unknown 72.6
1822 Female, age 42, unknown 53.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 52.9
Samples: 257

Max nTPM: 142.4
Min nTPM: 13.4
Std nTPM: 18.9
Median nTPM: 50.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 142.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 140.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 123.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 118.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 116.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 100.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 99.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 99.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 98.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 91.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 89.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 87.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 87.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 82.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 82.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 81.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 81.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 81.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 79.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 79.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 77.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 76.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 76.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 75.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 75.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 75.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 75.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 74.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 74.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 74.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 74.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 74.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 73.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 73.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 71.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 71.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 70.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 70.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 70.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 69.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 68.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 68.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 68.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 68.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 67.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 67.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 67.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 67.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 66.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 66.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 66.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 65.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 65.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 64.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 64.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 63.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 63.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 63.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 63.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 62.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 62.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 61.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 61.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 61.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 61.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 61.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 60.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 59.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 59.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 59.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 59.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 59.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 59.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 59.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 58.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 58.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 58.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 57.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 57.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 57.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 57.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 57.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 57.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 57.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 57.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 56.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 56.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 56.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 56.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 56.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 56.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 56.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 56.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 56.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 56.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 56.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 56.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 55.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 55.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 55.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 55.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 54.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 54.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 54.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 54.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 54.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 54.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 54.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 53.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 53.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 53.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 52.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 52.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 52.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 52.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 51.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 51.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 51.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 51.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 51.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 51.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 50.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 50.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 50.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 50.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 50.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 50.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 50.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 50.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 49.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 49.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 49.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 49.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 49.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 49.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 48.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 48.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 48.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 47.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 47.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 47.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 47.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 47.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 47.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 47.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 46.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 46.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 46.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 46.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 46.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 46.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 45.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 45.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 45.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 45.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 45.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 45.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 44.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 43.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 43.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 43.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 43.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 43.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 43.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 43.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 43.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 43.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 42.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 42.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 42.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 42.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 42.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 42.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 42.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 42.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 41.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 41.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 41.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 41.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 41.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 40.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 40.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 40.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 40.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 40.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 40.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 40.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 39.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 39.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 39.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 39.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 39.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 39.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 38.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 38.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 38.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 38.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 38.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 37.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 37.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 37.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 37.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 37.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 37.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 37.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 36.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 36.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 36.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 36.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 36.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 36.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 36.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 36.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 36.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 36.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 36.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 35.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 35.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 35.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 35.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 35.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 35.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 35.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 35.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 35.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 34.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 34.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 34.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 34.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 34.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 34.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 34.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 34.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 33.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 33.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 33.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 33.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 32.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 32.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 32.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 32.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 32.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 31.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 31.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 31.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 31.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 31.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 31.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 30.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 30.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 28.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 27.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 25.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 24.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 24.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 24.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 13.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

144.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 144.1
Samples: 4

Max nTPM: 169.8
Min nTPM: 128.9
Sample A Female 169.8
Sample B Female 145.4
Sample C Male 132.4
Sample D Male 128.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

250.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 250.8
Samples: 4

Max nTPM: 260.3
Min nTPM: 238.1
Sample A Male 246.2
Sample B Male 258.6
Sample C Female 260.3
Sample D Female 238.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.4
691 Antisense, RP_040315_01_16, Mouse strain C57BL/6J (56 days, male) 6.9
690 Antisense, RP_040315_01_16, Mouse strain C57BL/6J (56 days, male) 4.7
71919206 Antisense, RP_051012_02_B10, Mouse strain C57BL/6J (56 days, male) 0.0

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