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TPD52L2
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  • TPD52L2
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:55.3 nTPM
HPA Brain:54.8 nTPM
GTEx:55.3 nTPM
FANTOM5:50.6 Scaled Tags Per Million
Pig:32.4 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 48.8
2194 Female, age 79, both hemispheres 53.1
2565 Male, age 75, midline 50.2
2816 Male, age 47, midline 49.5
1981 Female, age 72, midline 48.0
2048 Male, age 55, midline 43.0
Cervical spinal cord, dorsal horn
nTPM: 47.9
2173 Female, age 72, unknown 58.5
2296 Male, age 66, both hemispheres 52.0
2297 Male, age 75, both hemispheres 45.8
1877 Male, age 55, unknown 44.3
2069 Male, age 47, both hemispheres 44.2
2721 Male, age 90, both hemispheres 42.6
Cervical spinal cord, ventral horn
nTPM: 54.8
2820 Female, age 79, both hemispheres 64.0
2809 Male, age 90, both hemispheres 57.2
2098 Female, age 72, unknown 55.9
2068 Male, age 55, unknown 54.1
2480 Male, age 75, both hemispheres 53.6
2295 Male, age 66, both hemispheres 43.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 55.3
Samples: 204

Max nTPM: 97.2
Min nTPM: 37.3
Std nTPM: 9.5
Median nTPM: 53.7
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 97.2
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 88.3
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 78.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 76.3
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 76.3
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 76.1
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 75.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 73.3
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 72.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 72.0
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 71.8
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 71.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 71.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 71.4
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 70.9
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 70.7
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 70.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 69.8
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 69.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 68.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 68.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 67.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 67.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 67.1
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 66.6
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 66.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 65.9
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 65.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 65.8
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 65.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 65.3
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 64.7
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 64.6
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 64.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 64.4
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 64.2
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 64.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 64.2
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 63.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 63.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 63.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 62.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 62.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 62.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 61.9
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 61.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 61.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 61.6
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 61.3
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 60.8
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 60.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 60.6
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 60.5
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 60.1
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 60.1
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 60.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 59.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 59.7
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 59.6
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 59.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 59.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 59.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 59.0
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 59.0
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 58.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 58.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 58.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 58.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 57.9
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 57.9
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 57.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 57.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 57.2
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 56.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 56.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 56.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 56.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 56.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 56.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 56.2
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 56.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 55.9
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 55.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 55.5
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 55.3
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 55.0
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 55.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 54.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 54.8
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 54.7
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 54.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 54.7
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 54.7
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 54.6
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 54.3
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 54.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 54.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 53.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 53.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 53.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 53.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 53.7
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 53.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 53.6
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 53.5
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 53.4
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 53.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 53.2
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 53.2
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 53.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 53.0
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 52.9
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 52.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 52.8
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 52.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 52.6
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 52.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 52.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 52.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 52.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 52.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 52.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 52.0
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 51.9
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 51.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 51.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 51.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 51.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 51.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 51.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 51.1
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 50.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 50.7
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 50.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 50.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 50.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 50.3
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 50.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 50.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 50.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 50.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 49.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 49.7
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 49.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 49.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 49.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 48.9
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 48.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 48.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 48.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 48.4
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 48.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 48.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 48.2
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 48.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 48.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 48.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 47.9
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 47.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 47.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 47.5
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 47.4
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 47.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 47.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 47.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 47.2
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 47.1
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 47.0
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 47.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 46.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 46.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 46.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 46.6
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 46.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 46.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 45.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 45.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 45.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 45.2
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 45.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 45.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 44.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 44.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 44.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 44.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 44.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 43.5
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 43.3
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 42.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 42.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 42.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 42.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 42.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 42.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 42.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 42.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 42.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 41.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 41.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 39.6
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 38.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 38.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 38.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 37.3
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

50.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 50.6
FF:10181-103D1 60 years, female 52.9
FF:10159-103A6 76 years, female 48.2

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 29.4
Samples: 4

Max nTPM: 34.8
Min nTPM: 25.9
Sample A Female 25.9
Sample B Female 27.0
Sample C Male 34.8
Sample D Male 29.8
Ventral spinal cord
nTPM: 32.3
Samples: 4

Max nTPM: 35.4
Min nTPM: 27.5
Sample A Female 27.5
Sample B Female 33.0
Sample C Male 33.4
Sample D Male 35.4

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