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  • TISSUE

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  • CD99L2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:77.3 nTPM
HPA Brain:181.7 nTPM
GTEx:77.3 nTPM
Pig:34.8 nTPM
Mouse:101.1 nTPM
Allen mouse:8.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

181.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 147.8
2226 Male, age 75, left hemisphere 170.1
1961 Female, age 42, unknown 125.6
Dorsomedial nucleus
nTPM: 148.6
1989 Male, age 62, unknown 196.0
2017 Female, age 42, unknown 132.7
2041 Female, age 72, unknown 117.2
Lateral hypothalamic area
nTPM: 181.7
2228 Male, age 66, unknown 231.3
1791 Male, age 80, right hemisphere 180.0
2271 Male, age 75, both hemispheres 171.6
2412 Male, age 62, unknown 143.8
Mammillary body
nTPM: 165.9
1923 Female, age 72, unknown 226.5
2413 Male, age 66, unknown 157.7
1945 Male, age 80, right hemisphere 154.8
1948 Female, age 72, unknown 153.3
1834 Female, age 42, unknown 137.1
Paraventricular nucleus
nTPM: 135.9
2700 Male, age 62, unknown 135.9
Preoptic area
nTPM: 159.8
1907 Male, age 80, right hemisphere 188.0
2414 Female, age 72, unknown 150.8
1861 Female, age 42, unknown 140.7
Supraoptic nucleus
nTPM: 126.3
2835 Female, age 72, unknown 151.6
1894 Female, age 72, unknown 117.0
2043 Male, age 62, unknown 110.3
Ventromedial nucleus
nTPM: 149.8
1982 Female, age 72, unknown 166.1
1822 Female, age 42, unknown 133.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 77.3
Samples: 257

Max nTPM: 203.4
Min nTPM: 25.1
Std nTPM: 23.0
Median nTPM: 74.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 203.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 152.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 133.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 132.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 127.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 127.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 126.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 122.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 119.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 119.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 118.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 117.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 116.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 115.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 114.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 113.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 113.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 111.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 111.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 110.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 110.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 109.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 108.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 108.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 108.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 106.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 105.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 104.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 104.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 104.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 103.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 103.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 103.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 102.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 102.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 101.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 101.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 100.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 100.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 100.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 100.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 99.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 99.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 99.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 99.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 98.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 98.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 98.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 97.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 96.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 95.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 95.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 95.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 94.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 94.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 94.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 94.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 94.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 93.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 93.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 93.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 92.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 91.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 90.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 90.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 90.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 90.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 89.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 89.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 88.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 88.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 88.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 88.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 87.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 87.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 87.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 87.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 86.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 86.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 85.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 85.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 85.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 85.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 84.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 84.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 84.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 83.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 83.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 83.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 83.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 83.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 83.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 82.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 82.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 82.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 82.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 82.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 82.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 81.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 81.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 80.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 80.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 80.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 80.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 80.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 79.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 79.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 79.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 79.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 79.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 79.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 79.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 79.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 79.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 78.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 78.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 78.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 77.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 77.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 77.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 76.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 76.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 76.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 76.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 76.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 76.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 76.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 75.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 74.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 74.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 74.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 73.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 73.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 73.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 73.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 72.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 72.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 72.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 72.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 72.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 72.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 72.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 72.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 71.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 71.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 70.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 70.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 70.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 70.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 70.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 70.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 70.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 69.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 69.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 69.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 69.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 69.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 68.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 68.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 68.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 68.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 67.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 67.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 67.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 67.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 67.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 67.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 67.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 66.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 66.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 66.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 66.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 66.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 66.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 66.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 66.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 66.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 64.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 64.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 64.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 64.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 64.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 64.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 64.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 64.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 63.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 63.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 62.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 62.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 62.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 62.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 62.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 62.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 61.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 61.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 60.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 60.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 60.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 60.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 60.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 60.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 59.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 59.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 59.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 59.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 59.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 58.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 58.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 58.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 57.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 57.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 57.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 57.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 56.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 56.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 55.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 54.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 54.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 54.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 53.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 53.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 52.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 52.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 52.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 51.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 51.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 50.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 49.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 49.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 49.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 48.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 48.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 48.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 48.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 47.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 47.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 46.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 46.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 46.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 45.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 45.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 44.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 44.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 44.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 44.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 44.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 43.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 42.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 42.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 41.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 41.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 41.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 36.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 35.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 35.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 32.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 25.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 34.8
Samples: 4

Max nTPM: 45.1
Min nTPM: 25.9
Sample A Female 45.1
Sample B Female 33.2
Sample C Male 35.1
Sample D Male 25.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 101.2
Samples: 4

Max nTPM: 105.5
Min nTPM: 95.8
Sample A Male 99.8
Sample B Male 105.5
Sample C Female 103.5
Sample D Female 95.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.1
68637898 Antisense, RP_050126_01_H02, Mouse strain C57BL/6J (56 days, male) 8.1

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