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  • HTATSF1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:70.8 nTPM
HPA Brain:104.4 nTPM
GTEx:70.8 nTPM
Pig:35.2 nTPM
Mouse:44.8 nTPM
Allen mouse:1.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 93.0
2226 Male, age 75, left hemisphere 97.9
1961 Female, age 42, unknown 88.0
Dorsomedial nucleus
nTPM: 50.2
2041 Female, age 72, unknown 53.5
2017 Female, age 42, unknown 50.6
1989 Male, age 62, unknown 46.4
Lateral hypothalamic area
nTPM: 51.9
2228 Male, age 66, unknown 56.4
1791 Male, age 80, right hemisphere 53.4
2271 Male, age 75, both hemispheres 49.0
2412 Male, age 62, unknown 48.9
Mammillary body
nTPM: 51.6
1834 Female, age 42, unknown 57.5
1923 Female, age 72, unknown 51.8
1948 Female, age 72, unknown 50.7
1945 Male, age 80, right hemisphere 49.4
2413 Male, age 66, unknown 48.5
Paraventricular nucleus
nTPM: 65.3
2700 Male, age 62, unknown 65.3
Preoptic area
nTPM: 49.5
1907 Male, age 80, right hemisphere 50.9
2414 Female, age 72, unknown 49.3
1861 Female, age 42, unknown 48.2
Supraoptic nucleus
nTPM: 62.8
1894 Female, age 72, unknown 72.3
2043 Male, age 62, unknown 62.4
2835 Female, age 72, unknown 53.6
Ventromedial nucleus
nTPM: 104.4
1982 Female, age 72, unknown 114.4
1822 Female, age 42, unknown 94.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 70.8
Samples: 257

Max nTPM: 148.2
Min nTPM: 41.2
Std nTPM: 18.1
Median nTPM: 67.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 148.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 138.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 130.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 129.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 128.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 126.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 119.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 112.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 112.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 112.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 112.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 111.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 111.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 110.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 109.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 107.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 106.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 105.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 105.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 103.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 102.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 102.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 97.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 96.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 95.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 95.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 94.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 94.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 92.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 92.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 90.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 90.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 90.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 89.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 88.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 88.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 87.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 87.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 87.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 87.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 85.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 84.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 84.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 84.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 83.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 83.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 81.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 81.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 81.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 81.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 81.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 81.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 80.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 80.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 80.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 80.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 79.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 78.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 78.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 78.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 78.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 78.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 77.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 77.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 77.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 77.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 76.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 76.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 76.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 76.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 76.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 75.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 75.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 75.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 75.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 74.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 74.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 74.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 74.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 74.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 74.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 74.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 74.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 73.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 73.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 73.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 73.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 72.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 72.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 72.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 72.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 72.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 71.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 71.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 71.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 71.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 70.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 70.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 70.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 70.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 70.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 70.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 70.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 70.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 70.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 70.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 70.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 70.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 70.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 69.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 69.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 69.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 69.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 69.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 69.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 69.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 69.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 69.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 68.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 68.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 68.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 68.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 68.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 68.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 68.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 68.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 67.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 67.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 67.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 67.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 67.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 67.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 67.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 66.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 66.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 66.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 66.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 65.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 65.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 65.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 65.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 65.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 65.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 65.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 65.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 65.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 64.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 64.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 64.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 63.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 63.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 63.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 63.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 63.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 62.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 62.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 62.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 62.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 62.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 62.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 62.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 62.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 62.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 62.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 61.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 61.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 61.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 61.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 61.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 61.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 60.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 60.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 60.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 60.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 60.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 60.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 60.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 60.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 60.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 60.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 59.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 59.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 59.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 59.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 59.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 59.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 59.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 59.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 59.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 59.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 58.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 58.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 58.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 58.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 58.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 58.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 58.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 57.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 57.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 57.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 57.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 57.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 57.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 57.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 56.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 56.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 56.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 56.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 56.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 56.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 56.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 56.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 55.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 55.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 55.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 55.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 55.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 55.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 54.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 54.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 54.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 54.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 54.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 54.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 54.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 53.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 53.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 53.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 53.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 53.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 53.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 52.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 51.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 51.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 51.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 51.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 51.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 51.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 51.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 51.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 51.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 50.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 50.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 49.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 49.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 49.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 49.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 49.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 49.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 49.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 48.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 48.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 47.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 46.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 45.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 44.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 41.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 35.2
Samples: 4

Max nTPM: 44.6
Min nTPM: 26.9
Sample A Female 44.6
Sample B Female 34.2
Sample C Male 35.0
Sample D Male 26.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 44.8
Samples: 4

Max nTPM: 46.2
Min nTPM: 44.2
Sample A Male 44.5
Sample B Male 44.4
Sample C Female 44.2
Sample D Female 46.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.0
69059923 Antisense, RP_050317_04_E04, Mouse strain C57BL/6J (56 days, male) 1.0

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