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  • DCTN6
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:56.8 nTPM
HPA Brain:59.6 nTPM
GTEx:56.8 nTPM
Pig:56.1 nTPM
Mouse:60.6 nTPM
Allen mouse:1.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 41.5
2226 Male, age 75, left hemisphere 49.4
1961 Female, age 42, unknown 33.6
Dorsomedial nucleus
nTPM: 41.3
2041 Female, age 72, unknown 44.0
1989 Male, age 62, unknown 43.3
2017 Female, age 42, unknown 36.7
Lateral hypothalamic area
nTPM: 49.9
2228 Male, age 66, unknown 55.5
2271 Male, age 75, both hemispheres 53.9
1791 Male, age 80, right hemisphere 53.1
2412 Male, age 62, unknown 37.2
Mammillary body
nTPM: 59.6
1923 Female, age 72, unknown 75.3
1948 Female, age 72, unknown 60.4
2413 Male, age 66, unknown 55.5
1945 Male, age 80, right hemisphere 55.2
1834 Female, age 42, unknown 51.9
Paraventricular nucleus
nTPM: 47.2
2700 Male, age 62, unknown 47.2
Preoptic area
nTPM: 43.8
1907 Male, age 80, right hemisphere 48.0
2414 Female, age 72, unknown 42.3
1861 Female, age 42, unknown 41.2
Supraoptic nucleus
nTPM: 51.9
1894 Female, age 72, unknown 60.5
2043 Male, age 62, unknown 54.0
2835 Female, age 72, unknown 41.3
Ventromedial nucleus
nTPM: 37.3
1982 Female, age 72, unknown 40.5
1822 Female, age 42, unknown 34.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 56.8
Samples: 257

Max nTPM: 148.7
Min nTPM: 36.5
Std nTPM: 13.0
Median nTPM: 54.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 148.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 126.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 93.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 93.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 89.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 88.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 87.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 87.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 83.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 83.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 81.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 81.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 80.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 80.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 80.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 79.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 75.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 75.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 75.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 74.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 74.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 73.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 72.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 72.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 71.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 70.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 70.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 70.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 70.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 70.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 69.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 69.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 69.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 68.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 67.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 67.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 67.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 66.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 66.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 66.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 66.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 66.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 65.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 65.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 64.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 64.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 64.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 64.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 64.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 64.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 64.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 63.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 63.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 63.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 63.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 63.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 63.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 63.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 63.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 62.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 62.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 62.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 62.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 61.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 61.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 61.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 61.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 61.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 61.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 61.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 61.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 61.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 60.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 60.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 60.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 60.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 60.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 60.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 60.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 60.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 59.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 59.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 59.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 59.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 59.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 59.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 59.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 59.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 58.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 58.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 58.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 58.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 57.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 57.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 57.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 57.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 57.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 57.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 57.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 57.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 57.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 57.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 57.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 57.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 56.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 56.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 56.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 56.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 56.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 56.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 55.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 55.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 55.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 55.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 55.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 55.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 55.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 55.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 55.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 55.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 55.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 55.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 54.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 54.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 54.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 54.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 54.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 54.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 54.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 54.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 54.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 54.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 54.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 54.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 54.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 53.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 53.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 53.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 53.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 53.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 53.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 53.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 53.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 53.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 52.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 52.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 52.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 52.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 52.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 52.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 52.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 51.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 51.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 51.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 51.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 51.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 51.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 51.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 51.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 51.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 50.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 50.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 50.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 50.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 50.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 50.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 50.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 50.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 50.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 50.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 50.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 50.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 50.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 50.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 50.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 50.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 50.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 50.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 50.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 49.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 49.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 49.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 49.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 49.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 49.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 49.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 49.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 49.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 49.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 49.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 49.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 48.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 48.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 48.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 48.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 48.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 48.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 48.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 48.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 48.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 48.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 47.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 47.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 47.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 47.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 47.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 47.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 47.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 47.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 46.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 46.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 46.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 46.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 46.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 45.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 45.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 45.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 45.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 45.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 45.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 45.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 45.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 45.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 44.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 44.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 44.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 44.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 44.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 44.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 43.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 43.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 43.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 43.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 43.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 43.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 43.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 43.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 43.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 42.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 42.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 42.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 42.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 41.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 41.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 41.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 41.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 41.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 41.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 41.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 40.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 40.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 40.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 40.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 39.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 39.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 39.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 36.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 56.1
Samples: 4

Max nTPM: 78.3
Min nTPM: 43.5
Sample A Female 78.3
Sample B Female 55.3
Sample C Male 47.3
Sample D Male 43.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 60.6
Samples: 4

Max nTPM: 68.6
Min nTPM: 55.6
Sample A Male 56.5
Sample B Male 55.6
Sample C Female 61.7
Sample D Female 68.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.9
323597 Antisense, RP_040609_01_H01, Mouse strain C57BL/6J (56 days, male) 3.7
68203507 Antisense, RP_041208_01_E03, Mouse strain C57BL/6J (56 days, male) 0.2

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