We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PPP2CB
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • PPP2CB
TISSUE PRIMARY DATA HIPPOCAMPUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Hippocampus
Tissue proteome
Tissue methods
HIPPOCAMPUS - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:167.2 nTPM
GTEx:194.5 nTPM
FANTOM5:143.9 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA043236Antibody CAB018600
Glial cells LowLow
Neuronal cells HighHigh





HIPPOCAMPUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

167.2
Sample id Sample description nTPM
Hippocampus
nTPM: 167.2
1898 Male, age 80, left hemisphere 213.8
1855 Male, age 76, left hemisphere 182.1
2529 Female, age 94, left hemisphere 165.1
2148 Female, age 91, left hemisphere 160.8
1911 Female, age 85, right hemisphere 156.0
2621 Female, age 67, right hemisphere 125.1

HIPPOCAMPUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 194.5
Samples: 255

Max nTPM: 454.1
Min nTPM: 87.1
Std nTPM: 43.7
Median nTPM: 187.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 454.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 360.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 351.0
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 340.9
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 291.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 291.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 288.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 285.1
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 284.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 282.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 275.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 273.9
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 273.8
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 272.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 267.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 262.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 261.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 260.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 258.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 257.4
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 257.1
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 253.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 252.4
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 249.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 249.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 249.1
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 246.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 246.4
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 246.4
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 246.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 245.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 242.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 240.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 240.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 239.5
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 239.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 238.3
GTEX-1N2EE-0011-R1a-SM-F3K5K 60-69 years, male 237.1
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 235.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 235.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 235.0
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 233.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 233.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 229.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 228.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 227.9
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 227.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 227.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 226.2
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 225.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 224.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 223.9
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 223.0
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 222.4
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 221.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 221.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 221.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 221.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 220.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 218.8
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 218.5
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 218.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 217.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 215.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 214.8
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 214.4
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 212.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 211.0
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 211.0
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 210.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 209.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 209.3
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 207.1
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 206.7
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 206.7
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 206.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 205.8
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 205.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 205.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 205.4
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 205.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 204.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 203.6
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 203.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 201.2
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 201.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 201.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 200.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 200.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 200.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 199.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 199.9
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 199.8
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 199.4
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 199.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 198.1
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 198.1
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 196.8
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 196.7
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 196.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 196.0
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 195.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 195.8
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 195.5
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 195.3
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 195.0
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 195.0
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 194.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 194.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 194.4
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 193.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 193.1
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 192.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 192.6
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 191.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 191.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 190.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 190.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 190.5
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 190.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 189.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 189.6
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 189.3
GTEX-1QMI2-0011-R1b-SM-F3K5Q 60-69 years, male 189.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 188.9
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 188.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 188.0
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 187.5
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 186.9
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 186.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 186.6
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 185.3
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 185.0
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 184.8
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 184.7
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 184.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 184.1
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 184.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 183.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 182.8
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 182.7
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 182.5
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 181.6
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 181.4
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 180.6
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 179.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 179.7
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 179.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 179.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 179.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 178.9
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 178.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 178.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 177.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 176.9
GTEX-1JMQK-0011-R1a-SM-F6484 60-69 years, male 176.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 176.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 175.8
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 175.7
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 175.6
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 175.6
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 174.8
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 174.6
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 174.5
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 174.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 174.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 173.8
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 173.8
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 173.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 173.6
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 173.5
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 173.4
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 173.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 173.3
GTEX-1RDX4-0011-R1a-SM-F3K5H 50-59 years, female 172.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 172.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 172.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 172.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 172.3
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 172.0
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 171.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 171.6
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 171.0
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 171.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 170.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 170.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 170.1
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 169.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 169.8
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 169.6
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 169.3
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 169.3
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 166.8
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 166.7
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 166.2
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 166.0
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 165.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 165.2
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 165.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 165.2
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 165.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 165.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 164.6
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 163.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 163.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 163.3
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 162.6
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 162.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 162.1
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 162.0
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 161.0
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 160.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 160.4
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 160.3
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 160.1
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 159.5
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 158.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 158.0
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 157.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 156.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 152.5
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 152.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 151.9
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 151.7
GTEX-14BMV-0011-R1b-SM-G9ERL 50-59 years, male 149.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 149.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 149.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 149.4
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 149.0
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 148.9
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 148.9
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 148.4
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 146.6
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 145.2
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 144.6
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 143.5
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 143.4
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 142.7
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 141.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 141.5
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 141.4
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 140.2
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 139.8
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 139.8
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 139.0
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 134.0
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 130.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 127.6
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 127.0
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 122.8
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 122.0
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 117.8
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 115.6
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 113.2
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 87.1
Show allShow less

HIPPOCAMPUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

143.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 143.9
FF:10153-102I9 76 years, female 156.0
FF:10169-103B7 60 years, female 131.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo