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  • TISSUE

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  • NUCB1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:66.6 nTPM
HPA Brain:89.6 nTPM
GTEx:66.6 nTPM
Pig:77.4 nTPM
Mouse:88.6 nTPM
Allen mouse:2.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 75.6
2226 Male, age 75, left hemisphere 83.8
1961 Female, age 42, unknown 67.4
Dorsomedial nucleus
nTPM: 70.9
1989 Male, age 62, unknown 84.2
2041 Female, age 72, unknown 68.6
2017 Female, age 42, unknown 59.8
Lateral hypothalamic area
nTPM: 88.0
1791 Male, age 80, right hemisphere 111.5
2228 Male, age 66, unknown 88.2
2271 Male, age 75, both hemispheres 86.2
2412 Male, age 62, unknown 66.1
Mammillary body
nTPM: 89.6
1923 Female, age 72, unknown 107.9
2413 Male, age 66, unknown 97.7
1948 Female, age 72, unknown 82.9
1834 Female, age 42, unknown 82.4
1945 Male, age 80, right hemisphere 77.2
Paraventricular nucleus
nTPM: 73.5
2700 Male, age 62, unknown 73.5
Preoptic area
nTPM: 72.6
1861 Female, age 42, unknown 75.9
1907 Male, age 80, right hemisphere 75.7
2414 Female, age 72, unknown 66.2
Supraoptic nucleus
nTPM: 86.4
2835 Female, age 72, unknown 111.5
2043 Male, age 62, unknown 75.4
1894 Female, age 72, unknown 72.1
Ventromedial nucleus
nTPM: 66.2
1982 Female, age 72, unknown 68.9
1822 Female, age 42, unknown 63.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 66.6
Samples: 257

Max nTPM: 164.3
Min nTPM: 25.1
Std nTPM: 19.6
Median nTPM: 64.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 164.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 156.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 115.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 114.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 108.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 105.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 104.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 102.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 102.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 102.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 100.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 100.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 99.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 98.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 97.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 97.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 96.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 96.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 95.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 95.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 95.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 93.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 93.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 92.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 92.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 92.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 92.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 91.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 91.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 91.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 90.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 89.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 89.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 89.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 88.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 88.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 87.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 87.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 86.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 86.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 85.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 84.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 84.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 84.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 83.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 83.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 83.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 83.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 82.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 81.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 81.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 81.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 81.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 81.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 81.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 80.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 80.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 80.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 80.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 80.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 80.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 80.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 80.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 79.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 79.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 79.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 79.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 78.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 78.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 77.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 76.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 76.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 75.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 75.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 75.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 75.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 75.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 75.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 74.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 74.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 74.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 74.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 73.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 73.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 72.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 72.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 72.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 72.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 72.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 71.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 71.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 71.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 71.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 71.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 71.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 70.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 70.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 70.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 69.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 69.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 69.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 69.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 69.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 68.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 68.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 68.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 68.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 68.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 67.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 67.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 67.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 67.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 67.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 67.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 67.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 66.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 66.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 66.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 65.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 65.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 65.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 65.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 65.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 64.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 64.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 64.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 64.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 64.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 64.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 64.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 63.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 63.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 63.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 63.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 63.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 63.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 62.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 62.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 62.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 62.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 62.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 62.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 62.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 62.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 61.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 61.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 61.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 61.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 61.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 61.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 61.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 61.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 61.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 61.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 60.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 60.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 59.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 59.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 59.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 59.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 59.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 59.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 58.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 58.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 57.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 57.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 56.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 56.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 56.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 56.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 56.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 55.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 55.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 55.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 55.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 55.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 54.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 54.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 54.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 54.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 54.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 53.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 53.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 53.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 53.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 53.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 53.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 53.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 53.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 53.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 53.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 53.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 52.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 52.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 52.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 52.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 51.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 51.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 51.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 51.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 51.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 51.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 51.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 50.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 50.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 50.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 49.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 49.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 49.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 49.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 49.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 48.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 48.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 48.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 47.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 47.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 47.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 47.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 47.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 47.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 47.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 47.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 46.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 46.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 45.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 45.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 45.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 44.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 44.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 44.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 44.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 43.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 42.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 42.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 42.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 42.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 41.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 41.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 41.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 41.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 41.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 41.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 40.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 40.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 39.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 39.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 39.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 37.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 36.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 36.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 35.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 34.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 33.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 32.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 32.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 31.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 25.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 77.4
Samples: 4

Max nTPM: 90.6
Min nTPM: 61.6
Sample A Female 90.6
Sample B Female 74.2
Sample C Male 83.0
Sample D Male 61.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 88.6
Samples: 4

Max nTPM: 90.7
Min nTPM: 86.2
Sample A Male 90.7
Sample B Male 89.9
Sample C Female 86.2
Sample D Female 87.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.0
69782467 Antisense, RP_050505_03_A10, Mouse strain C57BL/6J (56 days, male) 2.0

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