HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:35.2 nTPM
HPA Brain:28.7 nTPM
GTEx:35.2 nTPM
FANTOM5:32.1 Scaled Tags Per Million
Pig:24.5 nTPM
Mouse:47.9 nTPM
Allen mouse:2.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047258
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 28.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.7
1898 Male, age 80, left hemisphere 32.2
1855 Male, age 76, left hemisphere 27.8
2621 Female, age 67, right hemisphere 26.0
2148 Female, age 91, left hemisphere 25.5
2529 Female, age 94, left hemisphere 24.6
1911 Female, age 85, right hemisphere 23.8
Dentate gyrus
nTPM: 24.6
2531 Female, age 67, both hemispheres 27.3
1927 Female, age 91, both hemispheres 27.0
2530 Female, age 94, left hemisphere 25.5
2010 Male, age 76, both hemispheres 24.5
2246 Female, age 85, both hemispheres 24.4
2528 Male, age 74, both hemispheres 19.1
Entorhinal gyrus
nTPM: 24.9
2764 Male, age 80, right hemisphere 29.4
1938 Female, age 85, left hemisphere 28.8
2117 Female, age 91, right hemisphere 24.7
1787 Male, age 76, left hemisphere 23.6
2613 Female, age 94, left hemisphere 22.7
2686 Male, age 75, right hemisphere 20.6
Hippocampus, CA1
nTPM: 28.4
2749 Male, age 80, left hemisphere 40.1
2045 Male, age 76, both hemispheres 27.9
2527 Male, age 74, both hemispheres 25.6
1873 Female, age 85, both hemispheres 24.7
2082 Female, age 91, right hemisphere 23.7
Hippocampus, CA2
nTPM: 26.3
1892 Male, age 76, both hemispheres 32.0
1963 Male, age 80, left hemisphere 29.2
2437 Female, age 94, left hemisphere 24.5
1940 Female, age 85, left hemisphere 24.2
2249 Male, age 74, both hemispheres 24.2
2113 Female, age 91, right hemisphere 23.8
Hippocampus, CA3
nTPM: 28.3
2137 Male, age 80, left hemisphere 36.9
1867 Male, age 76, both hemispheres 30.3
2436 Male, age 74, both hemispheres 29.6
2620 Female, age 94, left hemisphere 27.2
2861 Female, age 67, both hemispheres 23.6
1891 Female, age 85, both hemispheres 22.0
Parahippocampal cortex
nTPM: 24.7
2245 Female, age 91, both hemispheres 30.2
1933 Female, age 85, both hemispheres 28.7
2018 Male, age 76, both hemispheres 26.7
1850 Male, age 80, both hemispheres 26.4
2250 Female, age 67, right hemisphere 24.7
1990 Female, age 91, right hemisphere 24.0
2532 Female, age 72, left hemisphere 23.2
2622 Female, age 67, right hemisphere 21.6
2692 Male, age 74, both hemispheres 20.8
2693 Female, age 94, both hemispheres 20.2
Perirhinal gyrus
nTPM: 28.7
1847 Female, age 91, left hemisphere 31.3
1794 Male, age 80, right hemisphere 31.2
2521 Female, age 94, right hemisphere 29.1
1841 Female, age 85, right hemisphere 28.1
2848 Male, age 76, right hemisphere 23.6
Subiculum
nTPM: 25.7
1977 Female, age 85, both hemispheres 29.6
1901 Male, age 80, both hemispheres 28.2
2438 Female, age 94, left hemisphere 28.0
2619 Male, age 74, both hemispheres 24.7
2042 Male, age 76, both hemispheres 24.4
2729 Female, age 91, right hemisphere 19.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 35.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.2
Samples: 255

Max nTPM: 68.1
Min nTPM: 13.8
Std nTPM: 9.3
Median nTPM: 34.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 68.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 63.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 62.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 61.4
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 59.2
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 58.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 58.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 58.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 55.0
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 54.0
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 53.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.1
FF:10169-103B7 60 years, female 40.5
FF:10153-102I9 76 years, female 23.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 24.5
Pig sample Sample description nTPM
Subiculum
nTPM: 19.9
Samples: 4

Max nTPM: 23.7
Min nTPM: 17.2
Sample A Female 23.7
Sample B Female 18.9
Sample C Male 19.9
Sample D Male 17.2
Dorsal hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 31.8
Min nTPM: 19.5
Sample A Female 31.8
Sample B Female 22.1
Sample C Male 24.5
Sample D Male 19.5
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 23.2
Min nTPM: 16.9
Sample A Female 20.3
Sample B Female 23.2
Sample C Male 20.0
Sample D Male 16.9
Ventral hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 28.3
Min nTPM: 17.7
Sample A Female 24.5
Sample B Female 17.7
Sample C Male 28.3
Sample D Male 22.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 47.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.9
Samples: 4

Max nTPM: 49.6
Min nTPM: 44.8
Sample A Male 49.6
Sample B Male 44.8
Sample C Female 49.6
Sample D Female 47.6
Hippocampal formation
nTPM: 47.4
Samples: 4

Max nTPM: 54.3
Min nTPM: 41.8
Sample A Male 54.3
Sample B Male 41.8
Sample C Female 45.6
Sample D Female 47.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
73606582 Antisense, RP_051130_01_C02, Mouse strain C57BL/6J (56 days, male) 2.1

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