HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:86.7 nTPM
HPA Brain:115.2 nTPM
GTEx:86.7 nTPM
FANTOM5:98.3 Scaled Tags Per Million
Pig:112.4 nTPM
Mouse:69.7 nTPM
Allen mouse:1.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA075125
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 115.2
Sample id Sample description nTPM
Hippocampus
nTPM: 110.2
1898 Male, age 80, left hemisphere 121.5
2529 Female, age 94, left hemisphere 117.5
2621 Female, age 67, right hemisphere 110.8
2148 Female, age 91, left hemisphere 108.8
1911 Female, age 85, right hemisphere 103.1
1855 Male, age 76, left hemisphere 99.4
Dentate gyrus
nTPM: 108.3
2530 Female, age 94, left hemisphere 126.1
2010 Male, age 76, both hemispheres 116.2
2528 Male, age 74, both hemispheres 116.0
1927 Female, age 91, both hemispheres 111.0
2531 Female, age 67, both hemispheres 90.9
2246 Female, age 85, both hemispheres 89.4
Entorhinal gyrus
nTPM: 115.2
2764 Male, age 80, right hemisphere 137.3
2117 Female, age 91, right hemisphere 122.9
2613 Female, age 94, left hemisphere 118.5
1938 Female, age 85, left hemisphere 116.8
1787 Male, age 76, left hemisphere 112.9
2686 Male, age 75, right hemisphere 83.0
Hippocampus, CA1
nTPM: 106.6
2749 Male, age 80, left hemisphere 142.4
1873 Female, age 85, both hemispheres 108.1
2527 Male, age 74, both hemispheres 105.7
2045 Male, age 76, both hemispheres 90.9
2082 Female, age 91, right hemisphere 85.8
Hippocampus, CA2
nTPM: 109.2
1963 Male, age 80, left hemisphere 137.4
2249 Male, age 74, both hemispheres 134.9
1892 Male, age 76, both hemispheres 103.3
2437 Female, age 94, left hemisphere 102.2
1940 Female, age 85, left hemisphere 94.7
2113 Female, age 91, right hemisphere 82.7
Hippocampus, CA3
nTPM: 105.9
2620 Female, age 94, left hemisphere 128.9
2436 Male, age 74, both hemispheres 115.0
2137 Male, age 80, left hemisphere 112.7
1867 Male, age 76, both hemispheres 104.2
1891 Female, age 85, both hemispheres 88.1
2861 Female, age 67, both hemispheres 86.2
Parahippocampal cortex
nTPM: 97.0
1990 Female, age 91, right hemisphere 118.1
1933 Female, age 85, both hemispheres 108.9
2245 Female, age 91, both hemispheres 107.5
2532 Female, age 72, left hemisphere 101.0
2250 Female, age 67, right hemisphere 100.1
2018 Male, age 76, both hemispheres 96.1
1850 Male, age 80, both hemispheres 93.9
2622 Female, age 67, right hemisphere 91.2
2692 Male, age 74, both hemispheres 77.5
2693 Female, age 94, both hemispheres 75.9
Perirhinal gyrus
nTPM: 103.1
1847 Female, age 91, left hemisphere 117.9
1794 Male, age 80, right hemisphere 117.2
1841 Female, age 85, right hemisphere 95.8
2521 Female, age 94, right hemisphere 94.9
2848 Male, age 76, right hemisphere 89.8
Subiculum
nTPM: 106.0
1977 Female, age 85, both hemispheres 129.5
2619 Male, age 74, both hemispheres 114.7
1901 Male, age 80, both hemispheres 113.7
2042 Male, age 76, both hemispheres 99.8
2729 Female, age 91, right hemisphere 99.3
2438 Female, age 94, left hemisphere 78.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 86.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 86.7
Samples: 255

Max nTPM: 216.2
Min nTPM: 35.5
Std nTPM: 23.1
Median nTPM: 82.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 216.2
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 168.2
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 167.3
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 157.5
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 142.5
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 141.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 141.5
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 134.3
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 132.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 132.0
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 129.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 98.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.3
FF:10153-102I9 76 years, female 117.8
FF:10169-103B7 60 years, female 78.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 112.4
Pig sample Sample description nTPM
Subiculum
nTPM: 103.6
Samples: 4

Max nTPM: 134.3
Min nTPM: 84.1
Sample A Female 134.3
Sample B Female 95.4
Sample C Male 100.5
Sample D Male 84.1
Dorsal hippocampus
nTPM: 103.2
Samples: 4

Max nTPM: 126.6
Min nTPM: 90.8
Sample A Female 126.6
Sample B Female 100.2
Sample C Male 95.1
Sample D Male 90.8
Entorhinal cortex
nTPM: 90.0
Samples: 4

Max nTPM: 97.8
Min nTPM: 81.5
Sample A Female 90.6
Sample B Female 89.9
Sample C Male 97.8
Sample D Male 81.5
Ventral hippocampus
nTPM: 112.4
Samples: 4

Max nTPM: 145.3
Min nTPM: 83.8
Sample A Female 111.9
Sample B Female 83.8
Sample C Male 145.3
Sample D Male 108.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 69.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.2
Samples: 4

Max nTPM: 63.1
Min nTPM: 57.5
Sample A Male 57.5
Sample B Male 59.5
Sample C Female 60.6
Sample D Female 63.1
Hippocampal formation
nTPM: 69.8
Samples: 4

Max nTPM: 77.8
Min nTPM: 65.4
Sample A Male 68.1
Sample B Male 67.7
Sample C Female 65.4
Sample D Female 77.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
74581086 Antisense, RP_060215_02_E06, Mouse strain C57BL/6J (56 days, male) 1.2

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