HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:124.5 nTPM
HPA Brain:42.9 nTPM
GTEx:124.5 nTPM
FANTOM5:162.9 Scaled Tags Per Million
Pig:86.2 nTPM
Mouse:66.1 nTPM
Allen mouse:1.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018471
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 42.9
Sample id Sample description nTPM
Hippocampus
nTPM: 41.9
1898 Male, age 80, left hemisphere 49.3
2529 Female, age 94, left hemisphere 43.0
2621 Female, age 67, right hemisphere 42.5
1855 Male, age 76, left hemisphere 40.9
2148 Female, age 91, left hemisphere 38.0
1911 Female, age 85, right hemisphere 37.9
Dentate gyrus
nTPM: 36.2
2010 Male, age 76, both hemispheres 37.3
2246 Female, age 85, both hemispheres 37.3
2528 Male, age 74, both hemispheres 37.3
2530 Female, age 94, left hemisphere 36.3
1927 Female, age 91, both hemispheres 35.4
2531 Female, age 67, both hemispheres 33.5
Entorhinal gyrus
nTPM: 40.9
1938 Female, age 85, left hemisphere 48.5
1787 Male, age 76, left hemisphere 47.1
2764 Male, age 80, right hemisphere 41.2
2686 Male, age 75, right hemisphere 37.0
2117 Female, age 91, right hemisphere 36.1
2613 Female, age 94, left hemisphere 35.2
Hippocampus, CA1
nTPM: 41.4
2749 Male, age 80, left hemisphere 50.7
2527 Male, age 74, both hemispheres 45.5
1873 Female, age 85, both hemispheres 40.5
2082 Female, age 91, right hemisphere 35.5
2045 Male, age 76, both hemispheres 34.6
Hippocampus, CA2
nTPM: 39.2
1892 Male, age 76, both hemispheres 46.0
2113 Female, age 91, right hemisphere 38.3
2437 Female, age 94, left hemisphere 38.2
1940 Female, age 85, left hemisphere 37.9
2249 Male, age 74, both hemispheres 37.5
1963 Male, age 80, left hemisphere 37.4
Hippocampus, CA3
nTPM: 40.9
2137 Male, age 80, left hemisphere 50.7
1867 Male, age 76, both hemispheres 42.6
1891 Female, age 85, both hemispheres 41.9
2436 Male, age 74, both hemispheres 38.1
2620 Female, age 94, left hemisphere 36.8
2861 Female, age 67, both hemispheres 35.4
Parahippocampal cortex
nTPM: 41.2
2532 Female, age 72, left hemisphere 46.9
1933 Female, age 85, both hemispheres 45.9
2250 Female, age 67, right hemisphere 45.9
2245 Female, age 91, both hemispheres 45.6
2018 Male, age 76, both hemispheres 41.9
1850 Male, age 80, both hemispheres 39.6
1990 Female, age 91, right hemisphere 39.5
2693 Female, age 94, both hemispheres 39.5
2622 Female, age 67, right hemisphere 34.0
2692 Male, age 74, both hemispheres 33.4
Perirhinal gyrus
nTPM: 42.9
1847 Female, age 91, left hemisphere 49.6
2521 Female, age 94, right hemisphere 45.1
1841 Female, age 85, right hemisphere 42.3
2848 Male, age 76, right hemisphere 39.0
1794 Male, age 80, right hemisphere 38.6
Subiculum
nTPM: 38.5
1901 Male, age 80, both hemispheres 44.8
1977 Female, age 85, both hemispheres 43.2
2619 Male, age 74, both hemispheres 41.2
2042 Male, age 76, both hemispheres 36.5
2438 Female, age 94, left hemisphere 36.3
2729 Female, age 91, right hemisphere 29.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 124.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 124.5
Samples: 255

Max nTPM: 294.3
Min nTPM: 59.9
Std nTPM: 32.6
Median nTPM: 120.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 294.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 240.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 232.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 232.4
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 208.0
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 198.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 194.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 193.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 188.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 188.2
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 186.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 162.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 162.9
FF:10169-103B7 60 years, female 193.1
FF:10153-102I9 76 years, female 132.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 86.2
Pig sample Sample description nTPM
Subiculum
nTPM: 79.0
Samples: 4

Max nTPM: 122.8
Min nTPM: 57.3
Sample A Female 122.8
Sample B Female 59.9
Sample C Male 76.0
Sample D Male 57.3
Dorsal hippocampus
nTPM: 79.4
Samples: 4

Max nTPM: 115.5
Min nTPM: 45.1
Sample A Female 95.2
Sample B Female 61.6
Sample C Male 115.5
Sample D Male 45.1
Entorhinal cortex
nTPM: 86.2
Samples: 4

Max nTPM: 104.5
Min nTPM: 69.6
Sample A Female 69.6
Sample B Female 83.2
Sample C Male 104.5
Sample D Male 87.6
Ventral hippocampus
nTPM: 73.6
Samples: 4

Max nTPM: 87.5
Min nTPM: 62.7
Sample A Female 73.8
Sample B Female 62.7
Sample C Male 70.3
Sample D Male 87.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 66.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.8
Samples: 4

Max nTPM: 63.9
Min nTPM: 60.6
Sample A Male 63.9
Sample B Male 60.6
Sample C Female 63.0
Sample D Female 63.7
Hippocampal formation
nTPM: 66.1
Samples: 4

Max nTPM: 74.2
Min nTPM: 56.7
Sample A Male 74.2
Sample B Male 65.8
Sample C Female 56.7
Sample D Female 67.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
68844319 Antisense, RP_050222_01_D04, Mouse strain C57BL/6J (56 days, male) 1.2

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