HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:69.7 nTPM
HPA Brain:71.8 nTPM
GTEx:69.7 nTPM
FANTOM5:81.9 Scaled Tags Per Million
Pig:54.4 nTPM
Mouse:74.8 nTPM
Allen mouse:4.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068786
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 71.8
Sample id Sample description nTPM
Hippocampus
nTPM: 55.5
1898 Male, age 80, left hemisphere 66.0
2621 Female, age 67, right hemisphere 60.6
2148 Female, age 91, left hemisphere 55.3
2529 Female, age 94, left hemisphere 55.1
1855 Male, age 76, left hemisphere 52.3
1911 Female, age 85, right hemisphere 43.9
Dentate gyrus
nTPM: 54.2
2010 Male, age 76, both hemispheres 60.9
1927 Female, age 91, both hemispheres 59.2
2531 Female, age 67, both hemispheres 58.3
2530 Female, age 94, left hemisphere 56.6
2246 Female, age 85, both hemispheres 48.7
2528 Male, age 74, both hemispheres 41.6
Entorhinal gyrus
nTPM: 58.8
2764 Male, age 80, right hemisphere 76.0
2613 Female, age 94, left hemisphere 63.1
1787 Male, age 76, left hemisphere 60.8
1938 Female, age 85, left hemisphere 60.2
2686 Male, age 75, right hemisphere 48.7
2117 Female, age 91, right hemisphere 44.0
Hippocampus, CA1
nTPM: 58.7
2749 Male, age 80, left hemisphere 85.8
2045 Male, age 76, both hemispheres 55.2
1873 Female, age 85, both hemispheres 55.1
2527 Male, age 74, both hemispheres 52.0
2082 Female, age 91, right hemisphere 45.5
Hippocampus, CA2
nTPM: 56.6
1892 Male, age 76, both hemispheres 69.0
2437 Female, age 94, left hemisphere 64.8
1963 Male, age 80, left hemisphere 62.0
1940 Female, age 85, left hemisphere 53.2
2113 Female, age 91, right hemisphere 48.3
2249 Male, age 74, both hemispheres 42.2
Hippocampus, CA3
nTPM: 57.6
2137 Male, age 80, left hemisphere 67.2
1867 Male, age 76, both hemispheres 61.6
2861 Female, age 67, both hemispheres 61.2
2620 Female, age 94, left hemisphere 59.4
2436 Male, age 74, both hemispheres 48.4
1891 Female, age 85, both hemispheres 47.5
Parahippocampal cortex
nTPM: 57.0
1850 Male, age 80, both hemispheres 73.2
2245 Female, age 91, both hemispheres 61.0
1933 Female, age 85, both hemispheres 60.7
2532 Female, age 72, left hemisphere 58.3
2622 Female, age 67, right hemisphere 56.2
2018 Male, age 76, both hemispheres 55.5
1990 Female, age 91, right hemisphere 55.3
2692 Male, age 74, both hemispheres 51.4
2693 Female, age 94, both hemispheres 49.6
2250 Female, age 67, right hemisphere 48.4
Perirhinal gyrus
nTPM: 71.8
1794 Male, age 80, right hemisphere 81.6
1847 Female, age 91, left hemisphere 74.7
2521 Female, age 94, right hemisphere 73.7
1841 Female, age 85, right hemisphere 66.6
2848 Male, age 76, right hemisphere 62.4
Subiculum
nTPM: 52.3
2438 Female, age 94, left hemisphere 61.3
1977 Female, age 85, both hemispheres 59.2
1901 Male, age 80, both hemispheres 56.5
2619 Male, age 74, both hemispheres 53.0
2042 Male, age 76, both hemispheres 42.3
2729 Female, age 91, right hemisphere 41.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 69.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.7
Samples: 255

Max nTPM: 151.5
Min nTPM: 28.2
Std nTPM: 22.4
Median nTPM: 65.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 151.5
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 142.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 138.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 133.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 132.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 123.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 122.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 121.1
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 115.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 114.7
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 114.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 81.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.9
FF:10169-103B7 60 years, female 94.5
FF:10153-102I9 76 years, female 69.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 54.4
Pig sample Sample description nTPM
Subiculum
nTPM: 46.5
Samples: 4

Max nTPM: 60.0
Min nTPM: 39.6
Sample A Female 60.0
Sample B Female 41.8
Sample C Male 44.6
Sample D Male 39.6
Dorsal hippocampus
nTPM: 54.4
Samples: 4

Max nTPM: 66.8
Min nTPM: 44.1
Sample A Female 66.8
Sample B Female 51.8
Sample C Male 54.8
Sample D Male 44.1
Entorhinal cortex
nTPM: 48.4
Samples: 4

Max nTPM: 51.6
Min nTPM: 43.3
Sample A Female 50.9
Sample B Female 47.8
Sample C Male 51.6
Sample D Male 43.3
Ventral hippocampus
nTPM: 50.6
Samples: 4

Max nTPM: 59.8
Min nTPM: 37.1
Sample A Female 47.5
Sample B Female 37.1
Sample C Male 57.9
Sample D Male 59.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 74.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.5
Samples: 4

Max nTPM: 74.7
Min nTPM: 69.4
Sample A Male 69.4
Sample B Male 74.7
Sample C Female 71.5
Sample D Female 74.5
Hippocampal formation
nTPM: 74.8
Samples: 4

Max nTPM: 83.2
Min nTPM: 68.0
Sample A Male 83.2
Sample B Male 73.1
Sample C Female 68.0
Sample D Female 74.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
71992019 Antisense, RP_051012_04_A02, Mouse strain C57BL/6J (56 days, male) 4.0

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