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RPL18A
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  • RPL18A
TISSUE PRIMARY DATA KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Kidney
Tissue proteome
Kidney
Tissue methods
KIDNEY - Expression summary
Protein expression
Kidneyi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in glomeruli: Not detected
Cells in tubules: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1374.0 nTPM
HPA:356.8 nTPM
GTEx:1374.0 nTPM
FANTOM5:12.5 Scaled Tags Per Million
KIDNEY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

KIDNEY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA055259
Cells in glomeruli Not detected
Cells in tubules Low



KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

356.8
overview
Female, age 58
Kidney sample 55
nTPM: 582
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 518.1
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 480
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 669.2
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 112.7
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 133.6
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 436.4
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 161.1
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 118.5
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1374.0
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 1228.2
Samples: 104

Max nTPM: 3006.7
Min nTPM: 623.4
Std nTPM: 401.9
Median nTPM: 1128.1
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 3006.7
GTEX-15DCD-1926-SM-HAV33 70-79 years, female 2959.6
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 2060.8
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 1954.3
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 1932.9
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 1932.4
GTEX-1O9I2-1926-SM-F2TBQ 50-59 years, male 1834.7
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 1776.3
GTEX-16XZY-1026-SM-HAV39 70-79 years, male 1773.5
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 1770.6
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 1747.2
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 1740.9
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 1738.7
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 1691.8
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 1641.8
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 1632.7
GTEX-1LH75-1326-SM-F2I1R 50-59 years, female 1620.2
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 1600.1
GTEX-1JJE9-1026-SM-HL9TH 70-79 years, male 1594.1
GTEX-WL46-1926-SM-GNIN6 50-59 years, male 1558.4
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 1542.7
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 1537.6
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 1502.0
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 1441.1
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 1425.2
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 1413.0
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 1362.8
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 1345.7
GTEX-13112-2126-SM-5GCO4 50-59 years, male 1337.9
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 1309.8
GTEX-QDVN-1726-SM-HL9TO 50-59 years, male 1309.4
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 1288.9
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 1283.2
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 1278.3
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 1251.2
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 1249.6
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 1244.8
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 1230.1
GTEX-ZXG5-2026-SM-HAUZV 60-69 years, male 1224.9
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 1214.8
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 1212.4
GTEX-1RQEC-2426-SM-F2I1J 60-69 years, male 1211.8
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 1207.7
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 1187.6
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 1174.6
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 1165.9
GTEX-1117F-2126-SM-GIN9G 60-69 years, female 1165.6
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 1144.0
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 1140.4
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 1135.9
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 1130.4
GTEX-1ICLY-2026-SM-GA913 50-59 years, male 1128.8
GTEX-O5YV-1226-SM-EV795 60-69 years, female 1127.4
GTEX-14C39-2126-SM-664OH 40-49 years, male 1118.6
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 1108.8
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 1107.3
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 1106.8
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 1106.4
GTEX-14PJ2-1826-SM-HL9UB 50-59 years, male 1102.6
GTEX-14JG1-2326-SM-HAUZ5 40-49 years, male 1085.3
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 1082.6
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 1081.4
GTEX-16XZZ-2226-SM-HAV34 60-69 years, male 1070.2
GTEX-12696-0926-SM-5FQTV 60-69 years, male 1068.4
GTEX-13FHP-2126-SM-GIN8J 50-59 years, male 1063.4
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 1062.1
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 1027.8
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 1021.7
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 1015.2
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 1011.8
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 1010.6
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 1003.6
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 1003.4
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 994.4
GTEX-1QAET-2126-SM-F2TBS 50-59 years, male 987.3
GTEX-13O3O-1726-SM-GJ3RL 60-69 years, female 979.9
GTEX-1HCVE-2126-SM-HL9UO 50-59 years, male 975.8
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 969.8
GTEX-RN64-1626-SM-48FD7 50-59 years, male 961.3
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 957.1
GTEX-W5X1-1626-SM-H7OGO 40-49 years, female 944.8
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 928.9
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 923.6
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 921.5
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 917.1
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 893.2
GTEX-NFK9-1826-SM-HL9T3 40-49 years, male 879.1
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 876.7
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 870.6
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 864.5
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 860.8
GTEX-16Z82-2826-SM-HAUZZ 60-69 years, male 856.5
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 835.9
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 822.5
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 821.5
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 819.7
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 814.3
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 802.1
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 801.1
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 798.6
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 782.3
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 766.3
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 731.0
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 623.4
Show allShow less
Kidney - Medulla
Average nTPM: 1374.0
Samples: 11

Max nTPM: 2751.5
Min nTPM: 701.0
Std nTPM: 657.4
Median nTPM: 1230.3
GTEX-QEG5-2026-SM-H6Q6I 20-29 years, male 2751.5
GTEX-N7MS-1526-SM-HAUZP 60-69 years, male 2623.1
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 1492.1
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 1319.1
GTEX-SIU8-1926-SM-H7OG4 50-59 years, male 1252.1
GTEX-T6MN-1926-SM-GOQYD 50-59 years, male 1230.3
GTEX-QEG4-1526-SM-GPRWK 30-39 years, male 1070.1
GTEX-P4QS-1226-SM-HPAG8 60-69 years, male 894.5
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 893.6
GTEX-S33H-1526-SM-GQ1CB 30-39 years, male 886.5
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 701.0
Show allShow less

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

12.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 12.5
FF:10017-101C8 60,62,63 years, female 12.5

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