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RPL18A
HPA
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  • RPL18A
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
Tissue methods
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1729.1 nTPM
HPA:911.9 nTPM
GTEx:1729.1 nTPM
FANTOM5:9.3 Scaled Tags Per Million
SMALL INTESTINE - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA055259
Glandular cells Medium


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

911.9
overview
Male, age 65
Small intestine sample 232
nTPM: 1101.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 926.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 847.7
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 771.5

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1729.1
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1729.1
Samples: 207

Max nTPM: 3559.8
Min nTPM: 746.1
Std nTPM: 550.7
Median nTPM: 1604.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 3559.8
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 3533.5
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 3280.8
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 3181.0
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 3134.1
GTEX-1RQED-2826-SM-HLJQK 60-69 years, male 3067.4
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 3007.8
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2986.0
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2979.0
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 2949.6
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2846.1
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2815.1
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2799.4
GTEX-183FY-1626-SM-793D8 20-29 years, male 2740.8
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2723.8
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2708.4
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2551.1
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2514.8
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 2487.0
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 2456.8
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2446.5
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 2436.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 2424.5
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2413.9
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 2409.3
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2408.5
GTEX-1HKZK-2226-SM-GA91V 40-49 years, male 2398.2
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2392.5
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 2324.8
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 2309.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 2298.4
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 2282.7
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2280.2
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2248.0
GTEX-13O61-1326-SM-5KM31 60-69 years, male 2232.8
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2209.8
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2207.7
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 2191.6
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 2146.7
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 2123.3
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2119.4
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 2114.3
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 2112.1
GTEX-1M5QR-2226-SM-HLJRV 40-49 years, male 2111.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 2106.4
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2101.0
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 2096.7
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 2075.1
GTEX-1192X-2526-SM-59868 50-59 years, male 2070.6
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 2056.1
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 2044.0
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 2042.1
GTEX-1HSGN-2126-SM-GA8ZB 40-49 years, female 2025.3
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 2018.3
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2011.9
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 2010.2
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1996.0
GTEX-1C475-1426-SM-793CH 40-49 years, female 1982.7
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1969.4
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1966.6
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1964.6
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1964.5
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1950.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1950.8
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1943.3
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1933.2
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1924.2
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1896.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1894.9
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1892.8
GTEX-1MCYP-1626-SM-HLJQ5 20-29 years, female 1887.9
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1885.7
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1864.0
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1844.9
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1833.0
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1824.1
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1813.7
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1807.3
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1793.5
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1783.7
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1779.7
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1778.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1773.4
GTEX-1PFEY-1326-SM-HK791 30-39 years, male 1769.9
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1763.4
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1763.0
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1742.0
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1737.2
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1728.2
GTEX-13X6H-1826-SM-5O9D1 50-59 years, female 1726.4
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1725.4
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1712.0
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1694.0
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1687.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1676.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1673.0
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1653.9
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1652.0
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1642.3
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1638.3
GTEX-WHPG-1826-SM-GNTAH 50-59 years, male 1624.0
GTEX-U8XE-2226-SM-HAUZQ 30-39 years, male 1613.5
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1609.0
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1604.2
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1593.4
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1584.8
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1584.3
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1582.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1578.0
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1577.1
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1576.8
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1563.4
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1557.9
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1551.2
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1543.8
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1543.5
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1538.0
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1535.2
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1533.4
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1526.0
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1518.3
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1516.0
GTEX-W5X1-1926-SM-GOQYX 40-49 years, female 1514.8
GTEX-YJ8A-2126-SM-GQ1C7 20-29 years, male 1514.6
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1508.6
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1496.6
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1494.3
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1493.3
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1489.9
GTEX-1HCUA-1726-SM-GA8Z2 50-59 years, female 1486.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1485.8
GTEX-XPT6-1026-SM-GOQYN 20-29 years, male 1483.4
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1460.9
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1459.3
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1435.6
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1426.6
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1416.3
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1412.0
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1405.3
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1396.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1369.5
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1366.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1363.9
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1363.5
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1357.0
GTEX-ZV7C-1426-SM-GNTB8 50-59 years, male 1355.3
GTEX-ZPU1-1826-SM-GNTB3 40-49 years, male 1353.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1351.9
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1351.4
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1344.1
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1329.7
GTEX-144GM-1026-SM-5O9AZ 20-29 years, male 1327.9
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1326.5
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1324.8
GTEX-1S831-1526-SM-HLJQS 20-29 years, male 1321.3
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1316.2
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1315.7
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1309.2
GTEX-1NHNU-2526-SM-HK79M 50-59 years, male 1306.0
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1301.6
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1296.6
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1288.4
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1288.4
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1283.5
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1281.6
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1280.0
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1279.4
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1278.0
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1262.2
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1255.9
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1248.4
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1245.1
GTEX-X4LF-1326-SM-HLJSD 50-59 years, male 1230.2
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1229.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1225.9
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1218.2
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1217.5
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1206.4
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1198.3
GTEX-1HBPN-1926-SM-GA91H 50-59 years, male 1183.5
GTEX-1MA7W-0726-SM-HLJQU 20-29 years, female 1174.9
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1154.3
GTEX-ZT9X-1026-SM-HLJS2 40-49 years, male 1152.8
GTEX-YB5K-1126-SM-H6Q6O 40-49 years, female 1148.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1135.4
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1134.0
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1110.3
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1105.9
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1094.2
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1078.6
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 1073.5
GTEX-178AV-1226-SM-GOR11 40-49 years, male 1071.1
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1070.4
GTEX-14PN3-2026-SM-68729 60-69 years, female 1059.7
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1030.7
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1024.7
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1004.5
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 998.6
GTEX-X3Y1-1526-SM-H6Q6X 40-49 years, male 990.6
GTEX-YFCO-1326-SM-664NV 40-49 years, male 984.2
GTEX-1122O-1326-SM-5H11F 60-69 years, female 978.1
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 963.6
GTEX-111YS-1426-SM-5GID8 60-69 years, male 954.0
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 901.2
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 886.5
GTEX-ZTSS-0926-SM-59865 40-49 years, male 804.8
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 746.1
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

9.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 9.3
FF:10024-101D6 15,40,85 years, mixed 9.3

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