We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RARRES2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RARRES2
TISSUE URINARY BLADDER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Urinary bladder
Tissue proteome
Tissue methods
URINARY BLADDER - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:316.1 nTPM
HPA:105.7 nTPM
GTEx:316.1 nTPM
FANTOM5:102.8 Scaled Tags Per Million
URINARY BLADDER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

URINARY BLADDER - Annotated protein expression
Pending normal tissue analysis

URINARY BLADDER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.7
overview
Male, age 74
Urinary bladder sample 264
nTPM: 131.2
Cell types%
Urothelial cells:
5

Smooth muscle cells:
60

Fibroblasts:
20

Endothelial cells:
10

Other cell types:
5

overview
Male, age 80
Urinary bladder sample 265
nTPM: 97.8
Cell types%
Urothelial cells:
10

Smooth muscle cells:
45

Fibroblasts:
15

Endothelial cells:
10

Other cell types:
20

N/A
Female, age 0.1
Urinary bladder sample 1597
nTPM: 87.4
N/A
Female, age 0.1
Urinary bladder sample 1598
nTPM: 106.3

URINARY BLADDER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

316.1
GTEx sample id Sample description nTPM
Bladder
Average nTPM: 316.1
Samples: 77

Max nTPM: 988.7
Min nTPM: 62.4
Std nTPM: 155.7
Median nTPM: 315.4
GTEX-T5JC-1126-SM-GPIA1 20-29 years, male 988.7
GTEX-T6MN-2226-SM-EVYAM 50-59 years, male 630.2
GTEX-R45C-2426-SM-HL11G 60-69 years, female 555.6
GTEX-QDT8-2826-SM-GOQYY 30-39 years, female 537.7
GTEX-QDVJ-1526-SM-GPI84 50-59 years, male 534.1
GTEX-OXRK-1926-SM-GRR1N 50-59 years, female 524.0
GTEX-RN64-2426-SM-EZ6L2 50-59 years, male 521.0
GTEX-Q734-1226-SM-GRR21 40-49 years, female 510.3
GTEX-P78B-2126-SM-GQ1C3 40-49 years, female 509.8
GTEX-N7MT-1826-SM-GQ1C9 60-69 years, female 493.1
GTEX-QXCU-2226-SM-GPI87 50-59 years, male 487.4
GTEX-NPJ8-1126-SM-GNTAI 40-49 years, male 465.0
GTEX-PLZ5-1326-SM-GQ1C2 50-59 years, male 454.5
GTEX-S33H-1926-SM-EYYVH 30-39 years, male 447.1
GTEX-RWSA-2126-SM-H7OG7 40-49 years, male 432.0
GTEX-RNOR-2126-SM-EXURR 50-59 years, female 430.3
GTEX-PW2O-1026-SM-GPRWA 20-29 years, male 429.7
GTEX-QEG4-2126-SM-GQ1CE 30-39 years, male 425.3
GTEX-SE5C-1026-SM-4BRUG 40-49 years, female 422.4
GTEX-T2IS-2526-SM-GRR23 20-29 years, female 416.7
GTEX-REY6-2026-SM-GPRYL 60-69 years, male 397.7
GTEX-QDVN-1426-SM-GPRWL 50-59 years, male 396.0
GTEX-QCQG-0826-SM-GPI8H 50-59 years, female 394.8
GTEX-QEL4-1826-SM-EZ6KU 50-59 years, male 380.1
GTEX-QEG5-2326-SM-GRR2Z 20-29 years, male 378.8
GTEX-SUCS-1226-SM-GPI9A 70-79 years, male 375.7
GTEX-N7MS-2126-SM-GRR2X 60-69 years, male 375.4
GTEX-RWS6-1426-SM-GPRWQ 60-69 years, female 360.0
GTEX-TKQ2-0526-SM-GRR15 50-59 years, male 353.0
GTEX-P44H-2226-SM-E9U4P 40-49 years, male 345.8
GTEX-QV31-0926-SM-GQ1C6 30-39 years, male 344.3
GTEX-OOBJ-1926-SM-GRR1P 60-69 years, male 342.9
GTEX-P4QS-1926-SM-GQ1BY 60-69 years, male 342.6
GTEX-S4P3-0826-SM-H7OF3 50-59 years, female 340.2
GTEX-OIZF-1926-SM-7PBZS 60-69 years, male 327.3
GTEX-TMMY-1526-SM-4DXST 40-49 years, female 321.2
GTEX-P4PQ-1926-SM-GRR14 60-69 years, male 320.0
GTEX-PX3G-1926-SM-GQ1ED 20-29 years, female 315.9
GTEX-T8EM-1726-SM-GPRWO 40-49 years, male 315.4
GTEX-R55G-1326-SM-HAUYU 40-49 years, female 315.0
GTEX-OIZI-1926-SM-H7OGY 40-49 years, male 314.9
GTEX-OHPK-1926-SM-H7OF2 50-59 years, female 313.9
GTEX-U4B1-1226-SM-4DXT7 40-49 years, male 305.4
GTEX-PLZ6-1026-SM-GQ1C8 30-39 years, male 282.7
GTEX-POMQ-0926-SM-H6Q6H 20-29 years, female 271.5
GTEX-QMRM-1326-SM-HAUYS 50-59 years, male 269.8
GTEX-R55C-1226-SM-GOQY7 40-49 years, male 267.2
GTEX-QV44-1426-SM-GPI8D 50-59 years, male 263.5
GTEX-QLQ7-1226-SM-GOQYE 60-69 years, male 255.3
GTEX-S95S-0626-SM-EZ6L8 60-69 years, male 252.5
GTEX-P4QT-1926-SM-HAUYQ 50-59 years, female 249.1
GTEX-S32W-1126-SM-4AD5V 50-59 years, female 246.2
GTEX-U3ZM-0826-SM-4DXU6 40-49 years, male 241.8
GTEX-S4Q7-0926-SM-4AD5D 20-29 years, male 226.5
GTEX-Q2AH-1326-SM-GPRWF 40-49 years, male 223.8
GTEX-O5YT-1926-SM-H6Q82 20-29 years, male 206.1
GTEX-RM2N-1026-SM-GOQY8 50-59 years, male 200.0
GTEX-OIZH-1926-SM-GPRXO 50-59 years, male 197.6
GTEX-T5JW-1026-SM-EZ6LR 20-29 years, female 189.4
GTEX-S7SF-1126-SM-GQ1CH 20-29 years, female 178.6
GTEX-U3ZH-0826-SM-H6Q7I 30-39 years, male 175.8
GTEX-U3ZN-1226-SM-4DXUD 30-39 years, female 171.8
GTEX-RUSQ-1326-SM-GQ1EA 50-59 years, male 168.9
GTEX-S4UY-0926-SM-4AD6O 40-49 years, female 166.9
GTEX-QLQW-0826-SM-H7OG2 30-39 years, male 163.7
GTEX-R53T-1426-SM-H7OG3 50-59 years, female 159.0
GTEX-OOBK-1926-SM-HAUZL 40-49 years, male 149.2
GTEX-OHPL-1926-SM-HAV18 60-69 years, female 146.1
GTEX-P4PP-1926-SM-HAUZM 30-39 years, female 121.4
GTEX-S3XE-1226-SM-4AD4L 50-59 years, male 114.8
GTEX-OHPM-1926-SM-H7OG1 50-59 years, male 103.2
GTEX-PWCY-1126-SM-H7OGX 20-29 years, female 101.5
GTEX-T6MO-0926-SM-GPRWN 40-49 years, female 93.6
GTEX-Q2AI-1026-SM-GRR3I 40-49 years, male 86.6
GTEX-PWN1-1926-SM-HAUZN 40-49 years, female 72.2
GTEX-SNMC-0826-SM-4DM66 20-29 years, male 69.8
GTEX-SNOS-0526-SM-4DM54 40-49 years, male 62.4
Show allShow less

URINARY BLADDER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

102.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Bladder
Scaled Tags Per Million: 102.8
FF:10011-101C2 55,58,79 years, mixed 102.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo