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  • EIF3A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:26.3 nTPM
HPA Brain:78.9 nTPM
GTEx:26.3 nTPM
Pig:41.1 nTPM
Mouse:74.4 nTPM
Allen mouse:8.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 54.1
1961 Female, age 42, unknown 55.9
2226 Male, age 75, left hemisphere 52.3
Dorsomedial nucleus
nTPM: 55.9
1989 Male, age 62, unknown 57.8
2017 Female, age 42, unknown 56.4
2041 Female, age 72, unknown 53.3
Lateral hypothalamic area
nTPM: 62.9
2412 Male, age 62, unknown 66.3
2271 Male, age 75, both hemispheres 64.3
1791 Male, age 80, right hemisphere 61.0
2228 Male, age 66, unknown 59.9
Mammillary body
nTPM: 66.5
1834 Female, age 42, unknown 75.4
1948 Female, age 72, unknown 69.0
2413 Male, age 66, unknown 65.1
1945 Male, age 80, right hemisphere 62.8
1923 Female, age 72, unknown 60.4
Paraventricular nucleus
nTPM: 78.9
2700 Male, age 62, unknown 78.9
Preoptic area
nTPM: 61.0
2414 Female, age 72, unknown 66.7
1861 Female, age 42, unknown 63.6
1907 Male, age 80, right hemisphere 52.6
Supraoptic nucleus
nTPM: 74.8
2835 Female, age 72, unknown 76.2
1894 Female, age 72, unknown 74.3
2043 Male, age 62, unknown 73.8
Ventromedial nucleus
nTPM: 57.5
1822 Female, age 42, unknown 57.6
1982 Female, age 72, unknown 57.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 26.3
Samples: 257

Max nTPM: 69.6
Min nTPM: 9.9
Std nTPM: 7.0
Median nTPM: 25.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 69.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 58.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 56.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 49.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 49.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 46.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 46.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 45.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 44.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 40.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 39.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 38.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 38.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 38.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 37.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 36.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 34.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 34.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 34.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 34.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 33.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 33.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 33.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 33.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 32.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 32.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 32.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 32.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 32.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 32.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 32.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 31.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 31.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 31.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 31.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 31.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 31.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 31.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 31.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 30.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 30.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 30.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 30.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 30.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 30.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 29.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 29.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 29.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 29.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 29.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 29.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 29.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 29.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 29.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 29.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 29.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 29.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 29.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 29.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 29.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 29.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 29.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 29.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 29.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 29.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 29.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 29.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 28.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 28.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 28.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 28.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 28.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 28.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 28.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 28.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 28.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 28.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 28.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 27.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 27.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 27.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 27.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 27.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 27.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 27.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 27.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 27.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 27.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 27.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 27.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 27.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 27.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 27.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 27.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 27.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 27.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 27.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 27.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 26.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 26.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 26.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 26.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 26.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 26.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 26.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 26.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 26.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 26.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 26.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 26.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 26.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 26.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 26.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 26.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 25.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 25.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 25.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 25.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 25.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 25.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 25.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 25.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 25.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 25.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 25.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 25.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 25.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 25.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 25.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 25.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 25.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 25.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 25.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 25.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 25.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 25.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 25.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 25.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 25.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 24.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 24.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 24.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 24.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 24.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 24.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 24.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 24.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 24.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 24.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 24.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 24.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 24.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 24.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 24.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 24.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 24.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 23.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 23.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 23.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 23.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 23.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 23.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 23.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 23.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 23.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 23.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 23.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 23.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 23.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 23.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 23.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 23.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 23.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 23.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 23.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 23.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 23.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 23.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 22.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 22.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 22.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 22.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 22.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 22.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 22.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 22.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 22.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 22.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 22.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 22.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 22.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 22.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 22.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 22.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 22.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 22.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 22.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 21.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 21.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 21.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 21.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 21.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 21.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 21.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 21.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 21.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 21.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 21.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 21.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 21.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 21.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 21.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 21.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 21.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 21.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 21.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 21.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 20.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 20.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 20.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 20.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 20.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 20.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 20.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 20.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 20.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 20.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 19.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 19.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 19.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 19.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 19.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 19.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 19.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 19.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 19.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 19.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 19.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 19.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 19.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 19.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 18.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 18.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 18.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 17.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 17.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 17.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 17.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 16.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 16.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 16.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 15.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 15.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 13.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 13.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 13.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 9.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 41.2
Samples: 4

Max nTPM: 48.7
Min nTPM: 33.8
Sample A Female 48.7
Sample B Female 40.0
Sample C Male 42.1
Sample D Male 33.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 74.4
Samples: 4

Max nTPM: 77.9
Min nTPM: 71.7
Sample A Male 72.5
Sample B Male 71.7
Sample C Female 77.9
Sample D Female 75.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.5
69671947 Antisense, RP_050428_02_F09, Mouse strain C57BL/6J (56 days, male) 8.5

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