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  • TISSUE

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  • SPOCK2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:142.8 nTPM
HPA Brain:348.6 nTPM
GTEx:142.8 nTPM
Pig:243.2 nTPM
Mouse:346.1 nTPM
Allen mouse:19.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

348.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 348.6
2226 Male, age 75, left hemisphere 427.6
1961 Female, age 42, unknown 269.6
Dorsomedial nucleus
nTPM: 323.8
1989 Male, age 62, unknown 480.7
2041 Female, age 72, unknown 264.0
2017 Female, age 42, unknown 226.7
Lateral hypothalamic area
nTPM: 339.0
1791 Male, age 80, right hemisphere 409.5
2271 Male, age 75, both hemispheres 355.8
2228 Male, age 66, unknown 316.7
2412 Male, age 62, unknown 274.2
Mammillary body
nTPM: 242.4
2413 Male, age 66, unknown 298.9
1923 Female, age 72, unknown 267.4
1945 Male, age 80, right hemisphere 245.7
1948 Female, age 72, unknown 206.3
1834 Female, age 42, unknown 193.5
Paraventricular nucleus
nTPM: 230.4
2700 Male, age 62, unknown 230.4
Preoptic area
nTPM: 285.3
1907 Male, age 80, right hemisphere 353.0
1861 Female, age 42, unknown 271.6
2414 Female, age 72, unknown 231.3
Supraoptic nucleus
nTPM: 226.7
2835 Female, age 72, unknown 266.3
1894 Female, age 72, unknown 221.8
2043 Male, age 62, unknown 192.0
Ventromedial nucleus
nTPM: 307.6
1982 Female, age 72, unknown 330.6
1822 Female, age 42, unknown 284.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

142.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 142.8
Samples: 257

Max nTPM: 346.7
Min nTPM: 23.9
Std nTPM: 47.2
Median nTPM: 142.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 346.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 280.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 268.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 244.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 239.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 238.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 236.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 231.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 229.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 228.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 227.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 225.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 223.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 218.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 218.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 217.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 216.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 212.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 211.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 211.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 208.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 206.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 204.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 202.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 200.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 198.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 198.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 198.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 198.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 197.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 196.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 195.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 195.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 194.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 194.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 192.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 192.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 192.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 191.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 191.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 189.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 189.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 187.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 187.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 187.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 186.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 186.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 183.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 181.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 181.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 180.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 180.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 179.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 176.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 176.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 175.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 175.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 174.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 174.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 173.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 173.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 173.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 172.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 171.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 170.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 170.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 169.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 169.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 169.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 169.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 167.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 167.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 166.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 166.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 164.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 163.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 163.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 163.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 162.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 162.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 162.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 162.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 162.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 162.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 162.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 161.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 161.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 159.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 159.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 159.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 158.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 157.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 157.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 156.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 155.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 155.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 155.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 155.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 155.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 154.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 153.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 153.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 153.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 153.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 150.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 150.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 150.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 149.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 148.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 148.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 147.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 147.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 146.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 146.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 146.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 146.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 146.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 146.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 146.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 145.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 145.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 145.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 145.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 144.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 144.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 144.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 143.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 143.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 142.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 142.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 142.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 141.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 141.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 141.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 140.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 139.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 139.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 139.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 139.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 139.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 138.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 138.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 137.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 137.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 137.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 137.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 137.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 137.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 137.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 136.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 135.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 135.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 135.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 135.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 134.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 134.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 133.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 131.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 131.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 131.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 131.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 130.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 129.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 129.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 129.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 128.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 128.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 127.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 126.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 125.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 124.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 124.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 124.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 124.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 123.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 122.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 122.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 120.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 118.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 118.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 117.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 117.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 116.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 116.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 113.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 113.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 112.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 112.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 111.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 111.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 110.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 110.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 110.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 109.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 108.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 108.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 108.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 107.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 107.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 106.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 106.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 104.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 104.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 103.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 103.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 100.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 100.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 99.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 99.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 99.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 99.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 99.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 97.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 97.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 97.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 96.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 96.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 95.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 95.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 94.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 93.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 93.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 93.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 92.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 91.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 91.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 90.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 88.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 85.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 84.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 79.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 79.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 78.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 77.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 76.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 76.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 76.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 75.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 74.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 71.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 70.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 69.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 67.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 62.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 62.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 61.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 60.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 56.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 55.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 54.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 53.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 53.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 51.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 41.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 41.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 38.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 23.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

243.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 243.2
Samples: 4

Max nTPM: 315.0
Min nTPM: 187.5
Sample A Female 315.0
Sample B Female 236.0
Sample C Male 234.3
Sample D Male 187.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

346.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 346.1
Samples: 4

Max nTPM: 354.1
Min nTPM: 334.7
Sample A Male 349.4
Sample B Male 346.1
Sample C Female 354.1
Sample D Female 334.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 19.3
69262230 Antisense, RP_050301_01_F10, Mouse strain C57BL/6J (56 days, male) 28.8
70812774 Antisense, RP_050712_02_E12, Mouse strain C57BL/6J (56 days, male) 9.8

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