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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:44.2 nTPM
HPA Brain:37.8 nTPM
GTEx:44.2 nTPM
Pig:34.4 nTPM
Mouse:53.0 nTPM
Allen mouse:1.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 37.8
2226 Male, age 75, left hemisphere 56.1
1961 Female, age 42, unknown 19.6
Dorsomedial nucleus
nTPM: 23.2
2041 Female, age 72, unknown 28.1
1989 Male, age 62, unknown 21.7
2017 Female, age 42, unknown 19.9
Lateral hypothalamic area
nTPM: 37.6
2228 Male, age 66, unknown 44.5
2271 Male, age 75, both hemispheres 41.1
1791 Male, age 80, right hemisphere 36.9
2412 Male, age 62, unknown 28.1
Mammillary body
nTPM: 21.3
1923 Female, age 72, unknown 26.4
2413 Male, age 66, unknown 22.5
1948 Female, age 72, unknown 21.9
1945 Male, age 80, right hemisphere 21.1
1834 Female, age 42, unknown 14.6
Paraventricular nucleus
nTPM: 27.2
2700 Male, age 62, unknown 27.2
Preoptic area
nTPM: 24.1
1907 Male, age 80, right hemisphere 30.0
2414 Female, age 72, unknown 23.7
1861 Female, age 42, unknown 18.5
Supraoptic nucleus
nTPM: 27.9
1894 Female, age 72, unknown 30.7
2043 Male, age 62, unknown 27.0
2835 Female, age 72, unknown 26.0
Ventromedial nucleus
nTPM: 19.8
1822 Female, age 42, unknown 19.8
1982 Female, age 72, unknown 19.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 44.2
Samples: 257

Max nTPM: 102.0
Min nTPM: 12.2
Std nTPM: 15.1
Median nTPM: 45.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 102.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 98.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 83.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 81.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 81.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 80.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 77.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 76.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 75.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 71.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 70.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 70.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 69.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 67.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 67.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 66.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 64.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 63.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 62.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 62.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 61.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 61.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 61.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 61.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 61.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 61.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 60.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 60.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 60.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 60.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 60.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 60.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 59.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 59.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 59.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 58.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 58.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 57.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 57.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 57.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 57.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 57.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 57.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 57.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 57.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 57.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 57.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 57.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 56.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 56.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 56.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 56.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 55.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 55.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 55.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 55.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 55.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 54.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 54.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 54.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 54.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 53.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 53.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 53.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 53.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 53.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 53.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 53.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 53.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 52.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 52.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 52.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 52.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 52.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 52.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 52.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 52.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 52.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 52.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 51.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 51.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 50.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 50.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 50.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 50.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 50.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 50.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 50.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 50.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 50.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 49.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 49.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 49.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 49.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 49.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 49.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 49.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 49.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 49.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 49.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 49.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 48.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 48.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 48.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 47.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 47.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 47.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 47.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 47.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 47.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 47.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 47.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 47.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 47.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 47.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 47.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 46.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 46.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 46.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 45.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 45.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 45.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 45.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 45.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 45.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 45.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 45.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 45.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 45.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 45.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 44.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 44.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 44.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 44.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 44.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 44.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 44.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 43.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 43.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 43.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 43.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 43.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 43.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 42.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 42.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 42.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 42.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 42.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 41.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 41.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 41.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 41.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 41.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 40.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 40.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 40.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 39.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 39.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 39.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 39.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 39.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 39.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 38.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 38.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 38.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 38.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 38.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 38.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 37.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 37.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 37.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 37.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 37.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 36.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 36.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 36.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 36.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 36.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 35.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 35.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 35.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 35.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 34.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 34.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 34.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 34.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 34.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 34.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 33.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 33.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 33.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 33.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 33.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 33.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 33.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 32.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 32.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 32.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 32.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 32.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 32.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 32.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 31.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 31.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 30.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 30.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 30.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 30.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 30.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 30.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 30.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 29.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 29.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 28.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 28.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 28.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 28.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 28.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 28.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 27.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 27.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 26.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 26.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 26.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 25.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 25.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 25.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 24.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 24.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 24.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 22.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 22.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 22.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 22.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 22.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 22.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 21.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 21.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 21.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 21.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 21.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 21.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 21.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 20.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 20.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 20.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 19.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 18.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 18.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 17.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 17.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 17.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 15.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 15.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 13.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 12.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 12.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 34.5
Samples: 4

Max nTPM: 39.4
Min nTPM: 29.6
Sample A Female 39.4
Sample B Female 29.6
Sample C Male 31.7
Sample D Male 37.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 53.0
Samples: 4

Max nTPM: 61.5
Min nTPM: 39.0
Sample A Male 52.8
Sample B Male 61.5
Sample C Female 58.5
Sample D Female 39.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.4
70526017 Antisense, RP_050317_04_G10, Mouse strain C57BL/6J (56 days, male) 2.3
73718054 Antisense, RP_051121_04_C08, Mouse strain C57BL/6J (56 days, male) 0.5

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