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  • SCGB2A2
TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LACTATING BREAST LIVER LUNG LYMPH NODE
MIDBRAIN NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE
SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:172.7 nTPM
HPA:11.3 nTPM
GTEx:172.7 nTPM
FANTOM5:66.4 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody CAB026270
Glandular cells Not detected


SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.3
overview
Female, age 68
Salivary gland sample 216
nTPM: 8.8
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 25.3
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 0
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

172.7
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 172.7
Samples: 181

Max nTPM: 3184.3
Min nTPM: 0.0
Std nTPM: 355.1
Median nTPM: 50.7
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 3184.3
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 1769.8
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 1432.1
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 1140.9
GTEX-Y111-2626-SM-4TT24 50-59 years, male 1132.8
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 1052.6
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 1002.7
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 982.4
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 880.3
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 824.4
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 815.1
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 792.2
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 726.2
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 669.5
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 607.2
GTEX-1445S-2926-SM-5O993 60-69 years, male 456.1
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 426.5
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 414.2
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 403.2
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 371.1
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 355.6
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 330.0
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 324.6
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 310.0
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 307.9
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 296.4
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 287.3
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 286.8
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 277.5
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 271.7
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 260.9
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 256.2
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 250.5
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 244.0
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 243.8
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 243.0
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 236.1
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 235.4
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 232.2
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 229.8
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 215.6
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 206.2
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 198.1
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 194.9
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 192.2
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 189.7
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 182.8
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 178.4
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 170.2
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 162.6
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 162.0
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 152.2
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 142.3
GTEX-1B932-0626-SM-731EM 40-49 years, female 139.9
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 137.0
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 125.1
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 122.3
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 121.9
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 120.9
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 113.7
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 111.2
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 108.1
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 105.6
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 103.0
GTEX-146FR-1226-SM-5MR78 60-69 years, female 99.0
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 93.7
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 93.4
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 90.4
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 89.5
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 86.4
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 80.3
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 80.0
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 80.0
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 78.1
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 77.2
GTEX-13113-1526-SM-5EGHV 60-69 years, female 75.5
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 66.6
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 64.4
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 63.6
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 61.8
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 60.6
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 60.0
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 58.5
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 58.5
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 58.2
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 56.6
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 54.7
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 53.5
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 52.0
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 51.0
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 50.7
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 50.1
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 44.0
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 41.7
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 41.1
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 41.1
GTEX-X261-2426-SM-4PQZU 50-59 years, male 34.7
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 32.9
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 32.4
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 32.4
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 32.1
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 30.5
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 29.3
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 29.1
GTEX-178AV-1426-SM-6LLID 40-49 years, male 28.9
GTEX-15SHV-2226-SM-6M464 60-69 years, male 28.8
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 28.8
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 28.5
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 27.9
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 27.0
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 26.6
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 26.2
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 24.6
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 24.6
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 23.7
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 22.2
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 21.4
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 20.4
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 20.2
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 19.5
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 17.2
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 16.6
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 16.1
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 14.9
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 14.1
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 13.0
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 12.2
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 11.9
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 11.0
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 10.3
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 9.1
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 9.0
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 8.1
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 7.9
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 7.3
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 7.1
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 6.8
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 6.6
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 6.5
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 6.0
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 5.6
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 5.0
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 4.9
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 4.9
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 4.8
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 4.5
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 3.7
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 2.4
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 2.3
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 2.3
GTEX-11P82-0926-SM-5986X 20-29 years, male 2.1
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 1.7
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 1.7
GTEX-13O21-1926-SM-5MR39 50-59 years, male 1.6
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 1.6
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 1.4
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 1.0
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 0.7
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 0.6
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 0.6
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 0.5
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 0.4
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 0.4
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 0.4
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 0.2
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 0.1
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 0.1
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 0.1
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 0.0
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 0.0
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 0.0
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 0.0
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 0.0
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 0.0
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 0.0
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 0.0
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 0.0
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 0.0
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 0.0
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 0.0
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 0.0
Show allShow less

SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

66.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 1.8
FF:10199-103F1 23 years, male 1.8
Salivary gland
Scaled Tags Per Million: 66.4
FF:10093-102C3 16-60 years, mixed 66.4
Submaxillary gland
Scaled Tags Per Million: 4.0
FF:10202-103F4 24 years, male 4.0

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