HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:18.5 nTPM
HPA Brain:64.0 nTPM
GTEx:18.5 nTPM
FANTOM5:71.1 Scaled Tags Per Million
Pig:33.4 nTPM
Mouse:25.7 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067711
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 64.0
Sample id Sample description nTPM
Hippocampus
nTPM: 58.1
1911 Female, age 85, right hemisphere 68.3
2148 Female, age 91, left hemisphere 61.1
1898 Male, age 80, left hemisphere 58.5
2529 Female, age 94, left hemisphere 57.9
1855 Male, age 76, left hemisphere 51.9
2621 Female, age 67, right hemisphere 50.6
Dentate gyrus
nTPM: 60.3
1927 Female, age 91, both hemispheres 65.9
2010 Male, age 76, both hemispheres 60.5
2246 Female, age 85, both hemispheres 60.0
2530 Female, age 94, left hemisphere 59.5
2528 Male, age 74, both hemispheres 58.0
2531 Female, age 67, both hemispheres 57.8
Entorhinal gyrus
nTPM: 57.8
1938 Female, age 85, left hemisphere 63.3
2686 Male, age 75, right hemisphere 60.7
2117 Female, age 91, right hemisphere 60.6
2764 Male, age 80, right hemisphere 55.3
1787 Male, age 76, left hemisphere 54.1
2613 Female, age 94, left hemisphere 52.8
Hippocampus, CA1
nTPM: 64.0
1873 Female, age 85, both hemispheres 70.0
2045 Male, age 76, both hemispheres 69.7
2749 Male, age 80, left hemisphere 63.8
2082 Female, age 91, right hemisphere 61.7
2527 Male, age 74, both hemispheres 54.9
Hippocampus, CA2
nTPM: 60.7
2113 Female, age 91, right hemisphere 63.6
1963 Male, age 80, left hemisphere 61.6
2437 Female, age 94, left hemisphere 61.0
2249 Male, age 74, both hemispheres 60.3
1940 Female, age 85, left hemisphere 59.1
1892 Male, age 76, both hemispheres 58.8
Hippocampus, CA3
nTPM: 61.1
1891 Female, age 85, both hemispheres 72.7
1867 Male, age 76, both hemispheres 65.1
2436 Male, age 74, both hemispheres 59.0
2137 Male, age 80, left hemisphere 57.8
2620 Female, age 94, left hemisphere 57.5
2861 Female, age 67, both hemispheres 54.6
Parahippocampal cortex
nTPM: 58.6
1933 Female, age 85, both hemispheres 65.8
2018 Male, age 76, both hemispheres 65.1
1850 Male, age 80, both hemispheres 65.0
2532 Female, age 72, left hemisphere 63.0
1990 Female, age 91, right hemisphere 60.5
2250 Female, age 67, right hemisphere 56.0
2693 Female, age 94, both hemispheres 55.9
2245 Female, age 91, both hemispheres 55.6
2692 Male, age 74, both hemispheres 51.9
2622 Female, age 67, right hemisphere 47.0
Perirhinal gyrus
nTPM: 61.2
1841 Female, age 85, right hemisphere 69.8
2848 Male, age 76, right hemisphere 61.2
1794 Male, age 80, right hemisphere 59.1
2521 Female, age 94, right hemisphere 58.2
1847 Female, age 91, left hemisphere 57.6
Subiculum
nTPM: 61.7
1901 Male, age 80, both hemispheres 67.9
1977 Female, age 85, both hemispheres 65.0
2438 Female, age 94, left hemisphere 64.3
2042 Male, age 76, both hemispheres 61.8
2729 Female, age 91, right hemisphere 61.6
2619 Male, age 74, both hemispheres 49.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 18.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.5
Samples: 255

Max nTPM: 37.7
Min nTPM: 12.1
Std nTPM: 3.6
Median nTPM: 17.9
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 37.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 35.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 32.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 31.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 31.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 30.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 28.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.2
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 27.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 26.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 26.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 71.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.1
FF:10169-103B7 60 years, female 83.0
FF:10153-102I9 76 years, female 59.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 33.4
Pig sample Sample description nTPM
Subiculum
nTPM: 27.8
Samples: 4

Max nTPM: 32.2
Min nTPM: 25.1
Sample A Female 32.2
Sample B Female 27.7
Sample C Male 25.1
Sample D Male 26.2
Dorsal hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 37.1
Min nTPM: 31.3
Sample A Female 37.1
Sample B Female 31.3
Sample C Male 33.0
Sample D Male 32.2
Entorhinal cortex
nTPM: 27.5
Samples: 4

Max nTPM: 29.7
Min nTPM: 25.6
Sample A Female 28.7
Sample B Female 29.7
Sample C Male 26.0
Sample D Male 25.6
Ventral hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 33.0
Min nTPM: 25.1
Sample A Female 29.0
Sample B Female 25.1
Sample C Male 25.5
Sample D Male 33.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 25.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 27.3
Min nTPM: 22.7
Sample A Male 24.0
Sample B Male 27.3
Sample C Female 22.7
Sample D Female 23.1
Hippocampal formation
nTPM: 25.8
Samples: 4

Max nTPM: 26.5
Min nTPM: 24.4
Sample A Male 26.2
Sample B Male 26.5
Sample C Female 24.4
Sample D Female 25.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
71496312 Antisense, RP_050913_04_C07, Mouse strain C57BL/6J (56 days, male) 0.5

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