HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:53.3 nTPM
HPA Brain:32.9 nTPM
GTEx:53.3 nTPM
FANTOM5:153.8 Scaled Tags Per Million
Pig:69.4 nTPM
Mouse:47.3 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027915Antibody HPA027916
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 32.9
Sample id Sample description nTPM
Hippocampus
nTPM: 27.7
2529 Female, age 94, left hemisphere 33.8
1855 Male, age 76, left hemisphere 33.6
1911 Female, age 85, right hemisphere 26.8
1898 Male, age 80, left hemisphere 24.2
2148 Female, age 91, left hemisphere 24.2
2621 Female, age 67, right hemisphere 23.7
Dentate gyrus
nTPM: 24.8
2010 Male, age 76, both hemispheres 34.1
2246 Female, age 85, both hemispheres 31.6
2531 Female, age 67, both hemispheres 22.9
2530 Female, age 94, left hemisphere 21.1
1927 Female, age 91, both hemispheres 20.0
2528 Male, age 74, both hemispheres 19.3
Entorhinal gyrus
nTPM: 29.2
1938 Female, age 85, left hemisphere 37.4
1787 Male, age 76, left hemisphere 34.0
2117 Female, age 91, right hemisphere 30.7
2764 Male, age 80, right hemisphere 29.4
2686 Male, age 75, right hemisphere 28.0
2613 Female, age 94, left hemisphere 15.8
Hippocampus, CA1
nTPM: 29.9
2045 Male, age 76, both hemispheres 36.3
2527 Male, age 74, both hemispheres 34.0
2082 Female, age 91, right hemisphere 33.7
2749 Male, age 80, left hemisphere 25.0
1873 Female, age 85, both hemispheres 20.4
Hippocampus, CA2
nTPM: 27.9
2249 Male, age 74, both hemispheres 41.2
1940 Female, age 85, left hemisphere 35.0
2113 Female, age 91, right hemisphere 30.8
2437 Female, age 94, left hemisphere 22.3
1892 Male, age 76, both hemispheres 19.1
1963 Male, age 80, left hemisphere 19.0
Hippocampus, CA3
nTPM: 27.4
2436 Male, age 74, both hemispheres 57.8
1891 Female, age 85, both hemispheres 24.4
1867 Male, age 76, both hemispheres 23.4
2137 Male, age 80, left hemisphere 22.1
2861 Female, age 67, both hemispheres 19.0
2620 Female, age 94, left hemisphere 17.4
Parahippocampal cortex
nTPM: 32.9
2622 Female, age 67, right hemisphere 48.9
2692 Male, age 74, both hemispheres 48.3
2250 Female, age 67, right hemisphere 38.3
1933 Female, age 85, both hemispheres 35.6
1990 Female, age 91, right hemisphere 29.9
2245 Female, age 91, both hemispheres 29.3
2018 Male, age 76, both hemispheres 27.5
1850 Male, age 80, both hemispheres 26.4
2532 Female, age 72, left hemisphere 22.5
2693 Female, age 94, both hemispheres 21.9
Perirhinal gyrus
nTPM: 29.6
1847 Female, age 91, left hemisphere 37.0
1841 Female, age 85, right hemisphere 31.2
1794 Male, age 80, right hemisphere 30.9
2521 Female, age 94, right hemisphere 27.6
2848 Male, age 76, right hemisphere 21.2
Subiculum
nTPM: 29.4
2619 Male, age 74, both hemispheres 45.8
2438 Female, age 94, left hemisphere 36.3
2042 Male, age 76, both hemispheres 27.9
1977 Female, age 85, both hemispheres 24.2
1901 Male, age 80, both hemispheres 22.8
2729 Female, age 91, right hemisphere 19.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 53.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.3
Samples: 255

Max nTPM: 243.1
Min nTPM: 10.8
Std nTPM: 33.5
Median nTPM: 44.5
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 243.1
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 223.9
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 205.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 167.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 160.7
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 153.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 147.4
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 128.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 125.0
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 120.9
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 120.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 153.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 153.8
FF:10153-102I9 76 years, female 176.7
FF:10169-103B7 60 years, female 130.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 69.4
Pig sample Sample description nTPM
Subiculum
nTPM: 36.6
Samples: 4

Max nTPM: 47.4
Min nTPM: 29.2
Sample A Female 31.9
Sample B Female 29.2
Sample C Male 47.4
Sample D Male 37.9
Dorsal hippocampus
nTPM: 64.7
Samples: 4

Max nTPM: 86.1
Min nTPM: 47.0
Sample A Female 47.0
Sample B Female 55.8
Sample C Male 69.7
Sample D Male 86.1
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 35.2
Min nTPM: 21.8
Sample A Female 34.5
Sample B Female 35.2
Sample C Male 21.8
Sample D Male 23.3
Ventral hippocampus
nTPM: 69.5
Samples: 4

Max nTPM: 96.0
Min nTPM: 37.4
Sample A Female 96.0
Sample B Female 60.6
Sample C Male 83.8
Sample D Male 37.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 47.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.5
Samples: 4

Max nTPM: 40.6
Min nTPM: 32.0
Sample A Male 33.3
Sample B Male 32.0
Sample C Female 40.6
Sample D Female 36.2
Hippocampal formation
nTPM: 47.3
Samples: 4

Max nTPM: 56.8
Min nTPM: 39.4
Sample A Male 56.8
Sample B Male 45.8
Sample C Female 39.4
Sample D Female 47.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
72004440 Antisense, RP_050915_02_G09, Mouse strain C57BL/6J (56 days, male) 0.2
74357570 Antisense, RP_050915_02_G09, Mouse strain C57BL/6J (56 days, male) 0.2

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