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TPD52L1
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • TPD52L1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:149.3 nTPM
FANTOM5:303.8 Scaled Tags Per Million
Pig:147.4 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA027915Antibody HPA027916
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

149.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 149.3
Samples: 300

Max nTPM: 327.1
Min nTPM: 23.5
Std nTPM: 48.0
Median nTPM: 144.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 327.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 307.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 305.2
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 296.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 282.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 266.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 264.1
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 255.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 253.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 252.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 250.6
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 249.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 248.3
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 242.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 239.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 236.7
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 231.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 231.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 228.3
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 220.0
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 217.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 217.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 217.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 216.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 214.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 214.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 213.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 213.1
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 212.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 211.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 210.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 210.6
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 210.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 209.2
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 209.2
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 208.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 206.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 206.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 204.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 204.3
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 203.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 203.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 201.2
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 197.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 197.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 195.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 191.1
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 190.9
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 190.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 190.5
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 190.2
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 189.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 188.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 186.8
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 186.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 186.1
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 186.0
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 185.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 185.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 184.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 183.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 183.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 183.0
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 182.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 182.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 182.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 180.5
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 179.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 179.1
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 177.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 177.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 176.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 175.8
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 175.0
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 174.1
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 174.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 173.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 172.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 171.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 170.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 170.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 169.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 169.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 169.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 168.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 167.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 167.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 167.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 166.9
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 165.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 165.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 165.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 164.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 164.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 164.3
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 164.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 163.9
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 163.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 163.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 163.0
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 163.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 162.9
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 162.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 161.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 161.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 160.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 160.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 159.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 159.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 158.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 157.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 155.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 155.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 155.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 155.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 155.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 155.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 154.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 154.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 154.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 153.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 153.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 152.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 152.5
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 152.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 152.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 151.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 150.9
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 150.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 150.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 150.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 149.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 149.5
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 149.4
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 149.2
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 148.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 148.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 148.2
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 148.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 147.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 147.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 147.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 147.0
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 146.9
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 146.3
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 146.1
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 146.1
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 145.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 144.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 144.6
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 144.3
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 144.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 143.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 143.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 142.8
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 142.5
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 141.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 141.6
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 140.8
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 139.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 139.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 138.7
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 138.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 138.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 138.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 138.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 138.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 137.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 137.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 137.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 137.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 137.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 137.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 136.7
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 136.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 135.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 135.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 135.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 135.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 135.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 135.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 135.0
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 134.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 134.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 134.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 134.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 134.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 134.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 133.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 133.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 132.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 132.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 132.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 132.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 131.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 131.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 131.4
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 131.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 130.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 130.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 129.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 129.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 129.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 128.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 128.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 128.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 128.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 128.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 128.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 127.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 126.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 126.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 126.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 126.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 125.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 125.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 125.7
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 125.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 124.8
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 124.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 124.6
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 124.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 122.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 122.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 121.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 121.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 120.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 120.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 117.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 117.7
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 117.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 117.5
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 116.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 116.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 115.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 115.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 115.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 115.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 114.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 112.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 112.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 112.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 112.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 111.7
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 111.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 111.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 111.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 110.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 109.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 109.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 109.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 108.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 108.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 107.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 107.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 107.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 107.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 106.7
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 106.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 106.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 104.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 103.6
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 103.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 103.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 103.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 102.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 98.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 97.9
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 97.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 96.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 96.4
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 96.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 95.4
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 94.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 93.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 92.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 89.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 88.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 86.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 84.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 82.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 82.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 80.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 80.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 75.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 73.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 73.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 68.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 67.0
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 57.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 56.4
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 55.1
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 54.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 51.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 48.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 41.7
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 41.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 41.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 27.1
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 23.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

303.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 303.8
FF:10164-103B2 76 years, female 303.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

147.4
Pig sample Sample description nTPM
Caudate
nTPM: 147.4
Samples: 4

Max nTPM: 180.7
Min nTPM: 101.7
Sample A Female 101.7
Sample B Female 148.9
Sample C Male 180.7
Sample D Male 158.4

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