HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:10.1 nTPM
HPA Brain:34.3 nTPM
GTEx:10.1 nTPM
FANTOM5:24.5 Scaled Tags Per Million
Pig:26.3 nTPM
Mouse:55.4 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB010285Antibody CAB040578
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 34.3
Sample id Sample description nTPM
Hippocampus
nTPM: 25.7
1898 Male, age 80, left hemisphere 29.1
2148 Female, age 91, left hemisphere 26.3
2621 Female, age 67, right hemisphere 25.8
1911 Female, age 85, right hemisphere 25.0
2529 Female, age 94, left hemisphere 24.5
1855 Male, age 76, left hemisphere 23.7
Dentate gyrus
nTPM: 27.1
1927 Female, age 91, both hemispheres 32.3
2246 Female, age 85, both hemispheres 28.8
2010 Male, age 76, both hemispheres 28.0
2531 Female, age 67, both hemispheres 26.5
2528 Male, age 74, both hemispheres 26.3
2530 Female, age 94, left hemisphere 20.9
Entorhinal gyrus
nTPM: 26.5
1938 Female, age 85, left hemisphere 31.7
1787 Male, age 76, left hemisphere 29.0
2764 Male, age 80, right hemisphere 28.2
2613 Female, age 94, left hemisphere 24.0
2686 Male, age 75, right hemisphere 23.8
2117 Female, age 91, right hemisphere 22.5
Hippocampus, CA1
nTPM: 30.2
2749 Male, age 80, left hemisphere 37.3
2045 Male, age 76, both hemispheres 29.9
1873 Female, age 85, both hemispheres 29.3
2082 Female, age 91, right hemisphere 28.1
2527 Male, age 74, both hemispheres 26.4
Hippocampus, CA2
nTPM: 26.6
1892 Male, age 76, both hemispheres 28.7
1963 Male, age 80, left hemisphere 28.3
1940 Female, age 85, left hemisphere 26.9
2113 Female, age 91, right hemisphere 25.7
2249 Male, age 74, both hemispheres 25.7
2437 Female, age 94, left hemisphere 24.1
Hippocampus, CA3
nTPM: 27.5
2137 Male, age 80, left hemisphere 31.7
2620 Female, age 94, left hemisphere 29.8
2436 Male, age 74, both hemispheres 27.7
1867 Male, age 76, both hemispheres 26.8
1891 Female, age 85, both hemispheres 26.0
2861 Female, age 67, both hemispheres 23.1
Parahippocampal cortex
nTPM: 27.1
1850 Male, age 80, both hemispheres 32.4
1933 Female, age 85, both hemispheres 30.9
1990 Female, age 91, right hemisphere 30.2
2018 Male, age 76, both hemispheres 29.9
2693 Female, age 94, both hemispheres 28.2
2250 Female, age 67, right hemisphere 26.4
2532 Female, age 72, left hemisphere 26.4
2245 Female, age 91, both hemispheres 26.1
2622 Female, age 67, right hemisphere 20.9
2692 Male, age 74, both hemispheres 19.4
Perirhinal gyrus
nTPM: 34.3
1841 Female, age 85, right hemisphere 37.1
2848 Male, age 76, right hemisphere 34.1
1847 Female, age 91, left hemisphere 34.0
2521 Female, age 94, right hemisphere 33.8
1794 Male, age 80, right hemisphere 32.6
Subiculum
nTPM: 25.3
1977 Female, age 85, both hemispheres 30.0
1901 Male, age 80, both hemispheres 25.9
2729 Female, age 91, right hemisphere 25.9
2042 Male, age 76, both hemispheres 25.6
2619 Male, age 74, both hemispheres 22.4
2438 Female, age 94, left hemisphere 22.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 255

Max nTPM: 15.7
Min nTPM: 6.7
Std nTPM: 1.5
Median nTPM: 10.0
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 15.7
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 15.3
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 14.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 13.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 13.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 13.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 13.5
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 13.3
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 13.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 13.1
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 13.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 24.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.5
FF:10153-102I9 76 years, female 25.2
FF:10169-103B7 60 years, female 23.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 26.3
Pig sample Sample description nTPM
Subiculum
nTPM: 18.8
Samples: 4

Max nTPM: 23.0
Min nTPM: 17.2
Sample A Female 23.0
Sample B Female 17.9
Sample C Male 17.2
Sample D Male 17.2
Dorsal hippocampus
nTPM: 26.4
Samples: 4

Max nTPM: 29.2
Min nTPM: 21.2
Sample A Female 28.0
Sample B Female 29.2
Sample C Male 21.2
Sample D Male 27.0
Entorhinal cortex
nTPM: 21.2
Samples: 4

Max nTPM: 22.4
Min nTPM: 20.0
Sample A Female 21.4
Sample B Female 22.4
Sample C Male 20.9
Sample D Male 20.0
Ventral hippocampus
nTPM: 21.7
Samples: 4

Max nTPM: 28.3
Min nTPM: 18.1
Sample A Female 19.5
Sample B Female 18.1
Sample C Male 21.0
Sample D Male 28.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 55.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.2
Samples: 4

Max nTPM: 56.4
Min nTPM: 51.7
Sample A Male 51.7
Sample B Male 53.8
Sample C Female 54.9
Sample D Female 56.4
Hippocampal formation
nTPM: 55.4
Samples: 4

Max nTPM: 60.5
Min nTPM: 51.8
Sample A Male 51.8
Sample B Male 56.6
Sample C Female 60.5
Sample D Female 52.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
2400 Antisense, RP_040526_01_A01, Mouse strain C57BL/6J (56 days, male) 0.7
2399 Antisense, RP_040526_01_A01, Mouse strain C57BL/6J (56 days, male) 0.2
70918844 Antisense, RP_050712_04_F04, Mouse strain C57BL/6J (56 days, male) 0.0

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