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MACROH2A1
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  • SUMMARY

  • TISSUE

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  • MACROH2A1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:57.1 nTPM
HPA Brain:54.2 nTPM
GTEx:57.1 nTPM
Pig:107.0 nTPM
Mouse:77.7 nTPM
Allen mouse:5.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 54.2
2226 Male, age 75, left hemisphere 63.9
1961 Female, age 42, unknown 44.6
Dorsomedial nucleus
nTPM: 44.1
2041 Female, age 72, unknown 51.7
1989 Male, age 62, unknown 41.7
2017 Female, age 42, unknown 38.7
Lateral hypothalamic area
nTPM: 49.9
2271 Male, age 75, both hemispheres 62.7
2228 Male, age 66, unknown 50.2
1791 Male, age 80, right hemisphere 50.0
2412 Male, age 62, unknown 36.9
Mammillary body
nTPM: 39.0
1923 Female, age 72, unknown 51.5
1948 Female, age 72, unknown 37.9
2413 Male, age 66, unknown 37.9
1945 Male, age 80, right hemisphere 36.4
1834 Female, age 42, unknown 31.2
Paraventricular nucleus
nTPM: 39.1
2700 Male, age 62, unknown 39.1
Preoptic area
nTPM: 38.6
1907 Male, age 80, right hemisphere 41.4
1861 Female, age 42, unknown 40.9
2414 Female, age 72, unknown 33.5
Supraoptic nucleus
nTPM: 42.2
1894 Female, age 72, unknown 48.9
2835 Female, age 72, unknown 40.6
2043 Male, age 62, unknown 37.2
Ventromedial nucleus
nTPM: 41.7
1822 Female, age 42, unknown 43.3
1982 Female, age 72, unknown 40.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 57.1
Samples: 257

Max nTPM: 89.8
Min nTPM: 17.2
Std nTPM: 12.5
Median nTPM: 57.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 89.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 83.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 81.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 81.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 80.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 78.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 78.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 78.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 77.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 76.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 76.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 76.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 76.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 75.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 75.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 75.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 75.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 75.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 74.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 74.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 74.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 73.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 73.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 73.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 73.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 72.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 72.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 72.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 72.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 72.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 71.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 71.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 71.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 70.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 70.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 70.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 70.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 70.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 69.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 69.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 69.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 69.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 69.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 68.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 68.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 68.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 68.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 68.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 68.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 68.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 68.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 68.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 68.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 68.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 68.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 67.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 67.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 67.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 67.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 67.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 67.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 67.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 67.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 67.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 66.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 66.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 66.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 66.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 66.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 66.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 66.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 66.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 66.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 66.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 66.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 65.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 65.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 65.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 65.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 65.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 65.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 64.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 64.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 64.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 64.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 64.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 64.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 64.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 64.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 64.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 64.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 64.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 64.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 63.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 63.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 63.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 63.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 62.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 62.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 62.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 62.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 62.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 62.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 61.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 61.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 61.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 61.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 60.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 60.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 60.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 60.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 60.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 60.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 60.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 59.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 59.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 59.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 59.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 59.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 59.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 59.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 59.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 58.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 58.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 58.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 57.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 57.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 57.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 57.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 57.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 56.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 56.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 56.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 56.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 56.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 56.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 56.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 56.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 55.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 55.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 55.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 55.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 55.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 55.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 55.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 55.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 54.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 54.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 54.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 54.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 54.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 54.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 54.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 53.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 53.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 53.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 53.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 53.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 53.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 53.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 52.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 52.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 52.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 51.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 51.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 51.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 51.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 50.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 50.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 50.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 50.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 50.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 50.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 50.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 50.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 50.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 50.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 49.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 49.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 49.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 49.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 49.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 49.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 49.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 48.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 48.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 48.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 48.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 48.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 48.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 48.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 48.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 48.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 47.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 47.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 47.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 47.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 47.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 47.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 47.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 47.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 47.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 46.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 46.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 46.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 46.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 46.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 46.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 46.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 46.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 45.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 45.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 45.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 45.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 45.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 44.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 44.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 44.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 44.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 43.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 42.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 42.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 42.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 42.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 42.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 42.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 41.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 41.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 40.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 40.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 40.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 40.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 40.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 39.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 39.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 38.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 38.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 37.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 37.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 37.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 36.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 36.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 35.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 35.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 35.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 35.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 34.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 34.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 34.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 34.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 34.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 34.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 34.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 29.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 26.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 24.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 17.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 107.0
Samples: 4

Max nTPM: 136.1
Min nTPM: 85.3
Sample A Female 136.1
Sample B Female 102.3
Sample C Male 104.3
Sample D Male 85.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 77.7
Samples: 4

Max nTPM: 81.1
Min nTPM: 69.7
Sample A Male 80.7
Sample B Male 81.1
Sample C Female 79.4
Sample D Female 69.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.1
68269502 Antisense, RP_041129_01_F11, Mouse strain C57BL/6J (56 days, male) 5.1

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