HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:79.3 nTPM
HPA Brain:52.7 nTPM
GTEx:79.3 nTPM
FANTOM5:163.4 Scaled Tags Per Million
Pig:54.6 nTPM
Mouse:305.3 nTPM
Allen mouse:11.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046091
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 52.7
Sample id Sample description nTPM
Hippocampus
nTPM: 50.2
1898 Male, age 80, left hemisphere 62.1
2621 Female, age 67, right hemisphere 54.3
1855 Male, age 76, left hemisphere 53.5
2529 Female, age 94, left hemisphere 47.2
1911 Female, age 85, right hemisphere 45.6
2148 Female, age 91, left hemisphere 38.7
Dentate gyrus
nTPM: 47.7
2010 Male, age 76, both hemispheres 56.8
2530 Female, age 94, left hemisphere 54.3
2246 Female, age 85, both hemispheres 47.1
2528 Male, age 74, both hemispheres 46.2
1927 Female, age 91, both hemispheres 45.4
2531 Female, age 67, both hemispheres 36.5
Entorhinal gyrus
nTPM: 44.5
1938 Female, age 85, left hemisphere 49.1
1787 Male, age 76, left hemisphere 46.8
2117 Female, age 91, right hemisphere 44.8
2764 Male, age 80, right hemisphere 44.2
2686 Male, age 75, right hemisphere 41.9
2613 Female, age 94, left hemisphere 40.4
Hippocampus, CA1
nTPM: 52.7
2749 Male, age 80, left hemisphere 59.9
1873 Female, age 85, both hemispheres 57.3
2527 Male, age 74, both hemispheres 55.7
2045 Male, age 76, both hemispheres 52.0
2082 Female, age 91, right hemisphere 38.3
Hippocampus, CA2
nTPM: 50.6
1892 Male, age 76, both hemispheres 61.6
2249 Male, age 74, both hemispheres 61.2
1940 Female, age 85, left hemisphere 53.3
2437 Female, age 94, left hemisphere 46.1
1963 Male, age 80, left hemisphere 44.8
2113 Female, age 91, right hemisphere 36.5
Hippocampus, CA3
nTPM: 47.8
2436 Male, age 74, both hemispheres 64.7
1891 Female, age 85, both hemispheres 50.0
1867 Male, age 76, both hemispheres 49.7
2137 Male, age 80, left hemisphere 45.2
2620 Female, age 94, left hemisphere 39.6
2861 Female, age 67, both hemispheres 37.5
Parahippocampal cortex
nTPM: 46.5
1850 Male, age 80, both hemispheres 54.3
1933 Female, age 85, both hemispheres 51.0
2018 Male, age 76, both hemispheres 50.3
2245 Female, age 91, both hemispheres 49.8
2250 Female, age 67, right hemisphere 47.4
2692 Male, age 74, both hemispheres 44.1
2693 Female, age 94, both hemispheres 43.6
1990 Female, age 91, right hemisphere 42.9
2532 Female, age 72, left hemisphere 42.5
2622 Female, age 67, right hemisphere 38.8
Perirhinal gyrus
nTPM: 48.7
1847 Female, age 91, left hemisphere 53.1
1841 Female, age 85, right hemisphere 51.5
1794 Male, age 80, right hemisphere 51.1
2521 Female, age 94, right hemisphere 46.7
2848 Male, age 76, right hemisphere 41.2
Subiculum
nTPM: 47.4
2042 Male, age 76, both hemispheres 53.6
1977 Female, age 85, both hemispheres 52.0
1901 Male, age 80, both hemispheres 49.3
2438 Female, age 94, left hemisphere 49.1
2619 Male, age 74, both hemispheres 41.3
2729 Female, age 91, right hemisphere 39.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 79.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.3
Samples: 255

Max nTPM: 144.5
Min nTPM: 33.0
Std nTPM: 13.5
Median nTPM: 79.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 144.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 131.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 117.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 109.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 109.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 105.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 105.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 104.9
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 104.9
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 103.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 103.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 163.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 163.4
FF:10169-103B7 60 years, female 197.3
FF:10153-102I9 76 years, female 129.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 54.6
Pig sample Sample description nTPM
Subiculum
nTPM: 47.4
Samples: 4

Max nTPM: 61.1
Min nTPM: 40.0
Sample A Female 61.1
Sample B Female 47.0
Sample C Male 40.0
Sample D Male 41.6
Dorsal hippocampus
nTPM: 54.6
Samples: 4

Max nTPM: 69.5
Min nTPM: 42.6
Sample A Female 69.5
Sample B Female 50.9
Sample C Male 55.3
Sample D Male 42.6
Entorhinal cortex
nTPM: 48.8
Samples: 4

Max nTPM: 56.6
Min nTPM: 38.7
Sample A Female 50.5
Sample B Female 56.6
Sample C Male 49.2
Sample D Male 38.7
Ventral hippocampus
nTPM: 47.2
Samples: 4

Max nTPM: 55.5
Min nTPM: 38.1
Sample A Female 50.1
Sample B Female 38.1
Sample C Male 55.5
Sample D Male 45.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 305.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 266.1
Samples: 4

Max nTPM: 278.6
Min nTPM: 253.0
Sample A Male 253.0
Sample B Male 266.7
Sample C Female 278.6
Sample D Female 266.1
Hippocampal formation
nTPM: 305.3
Samples: 4

Max nTPM: 350.7
Min nTPM: 268.3
Sample A Male 350.7
Sample B Male 268.3
Sample C Female 316.2
Sample D Female 286.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
69262338 Antisense, RP_050303_02_B08, Mouse strain C57BL/6J (56 days, male) 11.6

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