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  • SUMMARY

  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:130.7 nTPM
HPA Brain:209.6 nTPM
GTEx:130.7 nTPM
Pig:136.7 nTPM
Mouse:37.0 nTPM
Allen mouse:14.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

209.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 113.9
1961 Female, age 42, unknown 113.9
2226 Male, age 75, left hemisphere 113.8
Dorsomedial nucleus
nTPM: 120.9
1989 Male, age 62, unknown 134.4
2017 Female, age 42, unknown 123.2
2041 Female, age 72, unknown 105.1
Lateral hypothalamic area
nTPM: 144.4
2412 Male, age 62, unknown 168.5
2271 Male, age 75, both hemispheres 151.0
2228 Male, age 66, unknown 135.9
1791 Male, age 80, right hemisphere 122.0
Mammillary body
nTPM: 152.0
1948 Female, age 72, unknown 169.8
1834 Female, age 42, unknown 160.7
1945 Male, age 80, right hemisphere 149.8
2413 Male, age 66, unknown 143.7
1923 Female, age 72, unknown 135.8
Paraventricular nucleus
nTPM: 209.6
2700 Male, age 62, unknown 209.6
Preoptic area
nTPM: 146.3
2414 Female, age 72, unknown 164.2
1861 Female, age 42, unknown 157.0
1907 Male, age 80, right hemisphere 117.6
Supraoptic nucleus
nTPM: 157.8
2835 Female, age 72, unknown 179.4
2043 Male, age 62, unknown 151.4
1894 Female, age 72, unknown 142.7
Ventromedial nucleus
nTPM: 123.1
1982 Female, age 72, unknown 123.3
1822 Female, age 42, unknown 123.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 130.7
Samples: 257

Max nTPM: 366.5
Min nTPM: 47.4
Std nTPM: 39.4
Median nTPM: 122.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 366.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 331.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 284.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 282.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 273.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 262.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 254.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 249.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 226.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 207.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 205.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 202.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 193.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 190.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 186.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 185.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 184.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 184.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 184.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 177.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 169.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 169.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 168.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 167.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 166.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 165.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 164.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 164.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 163.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 162.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 161.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 161.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 160.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 160.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 160.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 160.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 159.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 158.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 158.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 157.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 157.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 156.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 155.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 155.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 154.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 154.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 153.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 152.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 152.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 151.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 151.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 151.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 151.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 150.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 150.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 149.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 148.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 148.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 147.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 146.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 146.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 145.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 144.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 144.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 144.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 143.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 143.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 143.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 141.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 140.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 140.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 140.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 139.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 139.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 138.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 138.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 138.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 137.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 137.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 137.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 137.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 137.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 136.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 136.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 135.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 135.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 135.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 134.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 134.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 134.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 134.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 133.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 133.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 133.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 132.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 132.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 132.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 132.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 132.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 132.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 131.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 131.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 130.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 129.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 129.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 128.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 128.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 127.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 126.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 126.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 126.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 126.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 125.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 125.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 125.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 125.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 125.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 124.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 124.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 124.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 124.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 123.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 123.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 123.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 123.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 123.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 123.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 122.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 122.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 122.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 122.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 122.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 121.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 121.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 121.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 121.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 121.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 120.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 120.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 120.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 120.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 120.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 119.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 119.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 119.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 119.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 119.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 118.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 118.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 118.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 118.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 118.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 118.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 117.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 117.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 117.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 116.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 116.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 116.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 116.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 115.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 115.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 115.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 114.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 114.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 114.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 114.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 114.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 114.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 114.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 114.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 114.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 114.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 113.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 113.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 113.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 113.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 112.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 112.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 112.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 112.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 111.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 111.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 111.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 111.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 111.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 110.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 109.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 109.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 109.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 109.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 109.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 109.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 108.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 108.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 108.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 108.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 107.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 107.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 107.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 107.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 107.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 106.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 105.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 105.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 105.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 104.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 104.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 104.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 104.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 103.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 103.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 103.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 102.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 101.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 101.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 100.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 99.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 99.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 99.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 99.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 99.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 98.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 97.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 96.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 96.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 96.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 96.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 96.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 95.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 95.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 94.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 93.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 93.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 93.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 93.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 93.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 92.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 92.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 92.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 92.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 91.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 90.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 88.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 87.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 87.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 87.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 81.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 80.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 80.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 74.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 71.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 69.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 68.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 68.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 68.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 47.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 136.7
Samples: 4

Max nTPM: 165.4
Min nTPM: 104.8
Sample A Female 165.4
Sample B Female 137.0
Sample C Male 139.7
Sample D Male 104.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 37.0
Samples: 4

Max nTPM: 38.3
Min nTPM: 35.6
Sample A Male 37.9
Sample B Male 36.3
Sample C Female 38.3
Sample D Female 35.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 14.7
68442979 Antisense, RP_050111_01_B06, Mouse strain C57BL/6J (56 days, male) 14.7

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