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  • SUMMARY

  • TISSUE

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  • LANCL1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:48.1 nTPM
HPA Brain:135.9 nTPM
GTEx:48.1 nTPM
Pig:51.9 nTPM
Mouse:89.3 nTPM
Allen mouse:11.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 62.5
2226 Male, age 75, left hemisphere 81.3
1961 Female, age 42, unknown 43.7
Dorsomedial nucleus
nTPM: 73.0
2017 Female, age 42, unknown 85.7
1989 Male, age 62, unknown 84.8
2041 Female, age 72, unknown 48.4
Lateral hypothalamic area
nTPM: 115.6
2271 Male, age 75, both hemispheres 166.9
2228 Male, age 66, unknown 123.2
1791 Male, age 80, right hemisphere 98.3
2412 Male, age 62, unknown 74.0
Mammillary body
nTPM: 135.9
1948 Female, age 72, unknown 145.6
1923 Female, age 72, unknown 142.7
1945 Male, age 80, right hemisphere 139.4
2413 Male, age 66, unknown 127.5
1834 Female, age 42, unknown 124.1
Paraventricular nucleus
nTPM: 104.9
2700 Male, age 62, unknown 104.9
Preoptic area
nTPM: 103.1
2414 Female, age 72, unknown 140.4
1861 Female, age 42, unknown 96.9
1907 Male, age 80, right hemisphere 72.1
Supraoptic nucleus
nTPM: 109.5
2043 Male, age 62, unknown 134.1
1894 Female, age 72, unknown 113.7
2835 Female, age 72, unknown 80.8
Ventromedial nucleus
nTPM: 56.6
1982 Female, age 72, unknown 66.6
1822 Female, age 42, unknown 46.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 48.1
Samples: 257

Max nTPM: 150.0
Min nTPM: 17.5
Std nTPM: 24.7
Median nTPM: 41.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 150.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 148.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 141.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 138.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 133.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 127.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 126.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 117.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 110.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 106.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 106.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 101.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 100.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 96.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 93.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 93.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 91.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 89.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 88.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 87.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 85.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 83.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 82.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 81.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 81.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 80.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 79.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 78.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 78.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 78.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 76.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 76.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 75.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 75.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 74.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 73.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 73.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 73.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 72.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 70.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 68.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 68.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 68.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 67.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 67.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 66.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 66.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 65.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 65.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 64.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 63.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 62.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 62.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 61.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 60.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 60.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 59.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 59.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 58.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 57.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 57.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 57.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 56.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 56.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 56.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 55.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 54.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 54.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 53.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 52.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 52.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 52.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 52.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 52.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 52.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 51.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 51.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 51.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 50.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 50.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 50.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 49.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 49.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 49.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 49.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 49.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 49.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 48.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 48.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 48.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 47.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 47.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 47.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 47.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 46.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 46.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 46.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 46.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 46.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 46.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 46.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 46.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 45.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 45.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 45.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 45.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 45.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 45.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 44.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 44.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 44.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 44.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 44.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 44.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 43.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 43.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 43.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 43.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 42.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 42.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 42.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 42.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 42.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 42.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 42.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 42.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 41.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 41.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 41.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 40.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 40.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 40.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 40.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 40.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 40.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 40.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 39.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 39.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 39.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 39.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 39.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 39.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 38.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 38.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 38.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 38.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 38.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 38.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 38.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 38.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 37.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 37.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 37.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 37.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 37.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 37.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 37.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 37.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 37.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 37.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 36.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 36.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 35.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 35.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 35.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 35.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 35.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 35.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 35.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 35.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 35.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 34.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 34.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 34.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 34.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 34.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 34.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 34.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 33.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 33.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 33.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 33.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 33.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 33.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 33.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 32.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 32.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 32.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 32.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 31.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 31.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 31.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 31.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 31.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 31.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 31.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 31.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 30.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 30.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 30.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 30.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 30.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 30.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 30.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 30.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 29.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 29.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 29.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 29.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 29.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 29.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 28.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 28.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 28.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 28.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 27.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 27.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 27.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 27.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 26.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 26.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 26.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 26.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 26.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 26.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 26.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 25.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 25.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 25.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 25.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 25.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 25.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 25.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 25.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 24.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 23.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 23.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 23.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 23.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 22.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 22.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 22.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 21.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 21.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 21.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 21.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 21.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 21.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 20.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 20.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 20.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 20.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 20.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 19.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 17.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 17.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 17.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 52.0
Samples: 4

Max nTPM: 62.6
Min nTPM: 43.6
Sample A Female 62.6
Sample B Female 52.4
Sample C Male 49.2
Sample D Male 43.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 89.2
Samples: 4

Max nTPM: 92.5
Min nTPM: 85.3
Sample A Male 85.3
Sample B Male 90.5
Sample C Female 92.5
Sample D Female 88.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.6
2366 Antisense, RP_Baylor_102826, Mouse strain C57BL/6J (56 days, male) 16.5
74881159 Antisense, RP_060220_01_A08, Mouse strain C57BL/6J (56 days, male) 6.7

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