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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:17.4 nTPM
HPA Brain:25.3 nTPM
GTEx:17.4 nTPM
Pig:16.4 nTPM
Mouse:34.2 nTPM
Allen mouse:7.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 20.9
2226 Male, age 75, left hemisphere 23.4
1961 Female, age 42, unknown 18.3
Dorsomedial nucleus
nTPM: 21.5
2041 Female, age 72, unknown 24.7
2017 Female, age 42, unknown 19.9
1989 Male, age 62, unknown 19.8
Lateral hypothalamic area
nTPM: 20.6
1791 Male, age 80, right hemisphere 22.8
2271 Male, age 75, both hemispheres 20.5
2228 Male, age 66, unknown 19.6
2412 Male, age 62, unknown 19.5
Mammillary body
nTPM: 23.5
1923 Female, age 72, unknown 27.1
2413 Male, age 66, unknown 23.4
1834 Female, age 42, unknown 23.0
1948 Female, age 72, unknown 22.3
1945 Male, age 80, right hemisphere 21.7
Paraventricular nucleus
nTPM: 19.2
2700 Male, age 62, unknown 19.2
Preoptic area
nTPM: 21.2
1907 Male, age 80, right hemisphere 21.5
1861 Female, age 42, unknown 21.4
2414 Female, age 72, unknown 20.7
Supraoptic nucleus
nTPM: 25.3
1894 Female, age 72, unknown 28.1
2043 Male, age 62, unknown 26.2
2835 Female, age 72, unknown 21.6
Ventromedial nucleus
nTPM: 20.4
1982 Female, age 72, unknown 20.9
1822 Female, age 42, unknown 19.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 17.4
Samples: 257

Max nTPM: 27.9
Min nTPM: 11.4
Std nTPM: 2.5
Median nTPM: 17.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 27.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 26.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 23.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 23.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 23.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 23.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 22.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 22.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 22.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 22.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 22.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 22.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 21.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 21.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 21.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 21.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 21.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 21.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 21.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 21.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 21.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 20.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 20.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 20.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 20.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 20.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 20.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 20.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 20.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 20.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 20.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 20.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 20.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 20.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 20.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 20.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 20.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 19.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 19.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 19.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 19.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 19.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 19.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 19.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 19.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 19.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 19.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 19.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 19.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 19.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 19.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 19.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 19.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 19.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 19.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 19.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 19.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 19.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 19.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 19.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 19.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 19.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 19.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 19.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 19.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 19.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 19.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 19.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 18.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 18.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 18.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 18.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 18.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 18.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 18.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 18.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 18.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 18.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 18.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 18.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 18.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 18.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 18.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 18.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 18.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 18.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 18.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 18.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 18.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 18.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 18.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 18.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 18.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 18.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 18.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 18.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 18.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 18.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 18.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 18.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 18.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 18.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 18.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 18.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 17.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 17.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 17.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 17.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 17.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 17.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 17.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 17.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 17.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 17.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 17.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 17.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 17.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 17.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 17.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 17.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 17.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 17.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 17.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 17.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 17.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 17.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 17.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 17.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 17.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 17.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 17.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 17.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 17.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 17.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 17.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 17.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 17.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 16.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 16.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 16.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 16.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 16.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 16.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 16.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 16.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 16.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 16.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 16.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 16.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 16.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 16.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 16.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 16.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 16.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 16.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 16.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 16.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 16.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 16.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 16.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 16.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 16.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 16.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 16.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 16.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 16.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 16.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 16.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 16.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 16.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 16.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 16.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 16.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 16.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 16.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 16.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 16.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 16.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 15.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 15.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 15.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 15.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 15.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 15.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 15.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 15.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 15.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 15.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 15.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 15.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 15.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 15.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 15.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 15.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 15.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 15.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 15.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 15.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 15.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 15.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 15.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 15.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 15.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 15.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 15.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 15.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 15.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 15.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 15.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 15.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 15.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 15.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 15.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 15.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 15.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 15.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 15.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 15.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 14.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 14.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 14.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 14.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 14.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 14.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 14.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 14.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 14.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 14.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 14.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 14.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 14.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 14.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 14.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 14.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 14.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 14.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 14.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 14.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 14.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 14.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 13.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 13.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 13.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 13.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 13.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 13.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 13.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 13.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 13.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 13.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 13.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 13.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 13.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 13.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 13.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 11.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 11.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 16.4
Samples: 4

Max nTPM: 18.9
Min nTPM: 14.5
Sample A Female 18.9
Sample B Female 16.2
Sample C Male 16.0
Sample D Male 14.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 34.2
Samples: 4

Max nTPM: 36.6
Min nTPM: 33.0
Sample A Male 33.0
Sample B Male 34.0
Sample C Female 36.6
Sample D Female 33.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 7.2
68562982 Antisense, RP_050120_02_H04, Mouse strain C57BL/6J (56 days, male) 7.2

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