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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:123.0 nTPM
HPA Brain:461.0 nTPM
GTEx:123.0 nTPM
Pig:170.8 nTPM
Mouse:488.5 nTPM
Allen mouse:19.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

461.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 287.7
2226 Male, age 75, left hemisphere 343.2
1961 Female, age 42, unknown 232.3
Dorsomedial nucleus
nTPM: 284.6
1989 Male, age 62, unknown 357.3
2041 Female, age 72, unknown 268.8
2017 Female, age 42, unknown 227.8
Lateral hypothalamic area
nTPM: 384.8
2271 Male, age 75, both hemispheres 516.8
1791 Male, age 80, right hemisphere 438.7
2228 Male, age 66, unknown 350.7
2412 Male, age 62, unknown 233.0
Mammillary body
nTPM: 411.5
1923 Female, age 72, unknown 543.9
2413 Male, age 66, unknown 460.8
1945 Male, age 80, right hemisphere 363.0
1834 Female, age 42, unknown 354.0
1948 Female, age 72, unknown 335.7
Paraventricular nucleus
nTPM: 188.7
2700 Male, age 62, unknown 188.7
Preoptic area
nTPM: 253.6
2414 Female, age 72, unknown 272.3
1861 Female, age 42, unknown 259.0
1907 Male, age 80, right hemisphere 229.6
Supraoptic nucleus
nTPM: 461.0
1894 Female, age 72, unknown 519.1
2835 Female, age 72, unknown 466.7
2043 Male, age 62, unknown 397.2
Ventromedial nucleus
nTPM: 233.3
1982 Female, age 72, unknown 249.9
1822 Female, age 42, unknown 216.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 123.0
Samples: 257

Max nTPM: 314.1
Min nTPM: 34.9
Std nTPM: 52.0
Median nTPM: 118.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 314.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 278.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 260.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 252.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 250.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 249.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 243.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 241.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 233.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 233.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 227.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 227.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 222.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 222.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 219.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 219.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 218.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 213.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 211.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 211.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 209.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 200.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 196.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 196.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 195.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 194.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 191.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 190.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 190.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 187.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 187.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 185.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 184.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 179.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 179.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 174.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 174.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 172.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 172.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 172.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 171.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 170.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 169.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 168.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 166.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 166.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 165.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 164.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 164.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 163.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 161.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 161.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 161.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 160.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 159.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 159.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 158.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 158.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 158.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 158.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 157.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 156.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 156.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 155.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 155.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 154.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 154.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 153.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 152.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 151.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 150.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 148.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 148.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 147.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 146.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 145.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 145.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 144.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 143.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 142.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 142.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 141.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 140.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 140.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 139.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 139.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 137.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 136.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 135.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 135.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 135.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 135.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 135.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 134.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 134.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 134.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 134.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 133.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 133.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 133.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 133.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 133.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 132.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 132.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 132.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 131.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 130.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 130.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 129.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 129.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 129.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 129.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 126.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 126.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 126.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 126.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 125.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 124.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 124.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 122.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 122.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 121.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 121.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 121.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 119.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 119.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 119.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 118.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 118.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 118.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 117.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 117.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 117.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 116.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 115.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 115.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 115.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 114.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 114.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 114.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 114.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 113.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 113.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 112.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 111.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 110.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 110.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 108.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 108.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 107.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 107.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 107.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 106.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 105.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 105.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 104.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 104.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 102.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 101.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 100.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 100.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 99.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 99.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 99.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 98.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 98.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 98.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 96.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 95.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 95.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 94.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 94.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 93.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 93.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 92.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 92.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 92.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 92.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 90.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 90.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 90.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 89.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 88.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 87.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 87.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 86.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 86.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 85.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 84.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 83.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 83.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 83.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 82.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 82.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 81.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 80.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 80.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 80.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 79.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 79.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 79.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 75.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 75.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 74.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 74.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 74.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 73.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 72.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 71.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 71.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 71.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 68.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 68.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 67.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 67.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 66.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 66.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 65.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 65.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 65.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 65.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 65.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 65.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 64.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 64.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 63.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 63.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 63.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 62.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 61.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 60.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 60.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 59.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 59.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 59.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 57.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 55.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 55.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 55.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 55.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 54.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 54.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 53.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 52.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 52.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 52.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 49.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 46.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 45.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 44.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 44.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 43.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 41.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 40.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 40.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 37.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 34.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 170.8
Samples: 4

Max nTPM: 190.2
Min nTPM: 140.9
Sample A Female 178.5
Sample B Female 190.2
Sample C Male 173.6
Sample D Male 140.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

488.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 488.5
Samples: 4

Max nTPM: 510.0
Min nTPM: 448.9
Sample A Male 448.9
Sample B Male 500.9
Sample C Female 494.2
Sample D Female 510.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 19.9
69028479 Antisense, RP_050316_01_D05, Mouse strain C57BL/6J (56 days, male) 19.9

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