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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1.6 nTPM
HPA Brain:1.7 nTPM
GTEx:1.6 nTPM
Pig:6.0 nTPM
Mouse:0.9 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 0.0
1961 Female, age 42, unknown 0.1
2226 Male, age 75, left hemisphere 0.0
Dorsomedial nucleus
nTPM: 1.7
2041 Female, age 72, unknown 4.3
1989 Male, age 62, unknown 0.4
2017 Female, age 42, unknown 0.2
Lateral hypothalamic area
nTPM: 0.0
1791 Male, age 80, right hemisphere 0.0
2228 Male, age 66, unknown 0.0
2271 Male, age 75, both hemispheres 0.0
2412 Male, age 62, unknown 0.0
Mammillary body
nTPM: 0.0
2413 Male, age 66, unknown 0.3
1834 Female, age 42, unknown 0.0
1923 Female, age 72, unknown 0.0
1945 Male, age 80, right hemisphere 0.0
1948 Female, age 72, unknown 0.0
Paraventricular nucleus
nTPM: 0.0
2700 Male, age 62, unknown 0.0
Preoptic area
nTPM: 0.0
1861 Female, age 42, unknown 0.0
1907 Male, age 80, right hemisphere 0.0
2414 Female, age 72, unknown 0.0
Supraoptic nucleus
nTPM: 0.4
1894 Female, age 72, unknown 0.6
2043 Male, age 62, unknown 0.3
2835 Female, age 72, unknown 0.2
Ventromedial nucleus
nTPM: 1.0
1822 Female, age 42, unknown 1.7
1982 Female, age 72, unknown 0.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1.6
Samples: 257

Max nTPM: 16.8
Min nTPM: 0.0
Std nTPM: 3.0
Median nTPM: 0.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 16.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 13.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 13.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 13.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 12.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 12.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 12.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 11.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 10.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 10.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 9.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 9.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 9.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 8.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 8.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 8.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 8.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 8.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 7.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 7.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 7.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 7.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 6.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 5.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 5.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 5.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 5.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 5.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 4.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 4.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 4.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 4.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 4.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 3.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 3.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 3.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 3.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 3.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 3.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 3.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 3.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 3.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 2.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 2.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 2.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 2.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 2.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 2.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 2.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 2.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 2.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 2.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 2.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 2.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 2.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 2.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 2.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 2.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 1.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 1.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 1.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 1.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 1.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 1.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 1.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 1.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 1.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 0.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 0.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 0.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 0.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 0.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 0.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 0.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 0.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 0.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 0.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 0.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 0.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 0.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 0.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 0.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 0.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 0.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 0.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 0.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 0.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 0.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 0.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 0.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 0.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 0.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 0.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 0.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 0.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 0.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 0.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 0.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 0.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 0.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 0.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 0.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 0.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 0.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 0.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 0.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 0.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 0.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 0.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 0.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 0.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 0.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 0.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 0.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 0.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 0.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 0.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 0.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 0.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 0.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 0.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 0.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 0.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 0.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 0.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 0.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 0.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 0.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 0.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 0.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 0.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 0.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 0.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 0.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 0.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 0.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 0.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 0.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 0.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 0.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 0.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 0.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 0.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 0.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 0.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 0.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 0.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 0.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 0.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 0.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 0.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 0.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 0.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 0.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 0.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 0.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 0.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 0.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 0.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 0.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 0.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 0.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 0.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 0.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 0.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 0.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 0.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 0.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 0.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 0.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 0.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 0.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 0.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 0.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 0.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 0.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 0.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 0.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 0.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 0.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 0.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 0.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 0.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 0.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 0.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 0.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 0.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 0.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 0.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 0.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 0.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 0.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 0.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 0.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 0.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 0.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 0.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 0.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 0.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 0.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 0.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 0.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 0.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 0.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 0.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 0.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 0.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 0.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 0.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 0.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 0.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 0.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 0.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 0.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 0.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 0.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 0.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 0.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 0.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 0.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 0.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 0.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 0.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 0.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 0.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 0.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 0.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 0.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 0.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 0.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 0.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 0.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 0.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 0.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 0.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 0.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 0.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 0.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 0.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 0.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 0.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 0.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 0.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 0.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 0.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 0.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 0.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 0.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 0.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 0.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 6.0
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.4
Sample A Female 5.4
Sample B Female 5.7
Sample C Male 6.4
Sample D Male 6.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 0.9
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.8
Sample A Male 1.0
Sample B Male 0.8
Sample C Female 0.8
Sample D Female 1.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
71569115 Antisense, RP_050915_03_C04, Mouse strain C57BL/6J (56 days, male) 0.0
74514079 Antisense, RP_060208_01_H12, Mouse strain C57BL/6J (56 days, male) 0.0

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