HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.5 nTPM
HPA Brain:27.3 nTPM
GTEx:3.5 nTPM
FANTOM5:22.1 Scaled Tags Per Million
Pig:52.6 nTPM
Mouse:24.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 27.3
Sample id Sample description nTPM
Hippocampus
nTPM: 9.8
1898 Male, age 80, left hemisphere 17.7
1911 Female, age 85, right hemisphere 9.5
2621 Female, age 67, right hemisphere 9.2
1855 Male, age 76, left hemisphere 8.8
2529 Female, age 94, left hemisphere 7.1
2148 Female, age 91, left hemisphere 6.6
Dentate gyrus
nTPM: 8.9
1927 Female, age 91, both hemispheres 17.9
2531 Female, age 67, both hemispheres 8.3
2010 Male, age 76, both hemispheres 7.4
2528 Male, age 74, both hemispheres 7.4
2246 Female, age 85, both hemispheres 7.1
2530 Female, age 94, left hemisphere 5.4
Entorhinal gyrus
nTPM: 12.0
2764 Male, age 80, right hemisphere 15.3
1938 Female, age 85, left hemisphere 15.2
1787 Male, age 76, left hemisphere 13.6
2686 Male, age 75, right hemisphere 11.4
2613 Female, age 94, left hemisphere 10.7
2117 Female, age 91, right hemisphere 5.6
Hippocampus, CA1
nTPM: 11.8
2749 Male, age 80, left hemisphere 22.3
2527 Male, age 74, both hemispheres 11.8
1873 Female, age 85, both hemispheres 11.7
2082 Female, age 91, right hemisphere 7.5
2045 Male, age 76, both hemispheres 5.5
Hippocampus, CA2
nTPM: 13.1
1940 Female, age 85, left hemisphere 19.2
1892 Male, age 76, both hemispheres 15.6
2249 Male, age 74, both hemispheres 12.6
2113 Female, age 91, right hemisphere 12.1
2437 Female, age 94, left hemisphere 11.3
1963 Male, age 80, left hemisphere 7.6
Hippocampus, CA3
nTPM: 11.6
2137 Male, age 80, left hemisphere 17.3
1891 Female, age 85, both hemispheres 12.3
2436 Male, age 74, both hemispheres 12.2
1867 Male, age 76, both hemispheres 12.1
2861 Female, age 67, both hemispheres 8.4
2620 Female, age 94, left hemisphere 7.1
Parahippocampal cortex
nTPM: 17.6
2693 Female, age 94, both hemispheres 24.7
2250 Female, age 67, right hemisphere 22.9
1850 Male, age 80, both hemispheres 21.9
2245 Female, age 91, both hemispheres 21.2
1990 Female, age 91, right hemisphere 18.2
1933 Female, age 85, both hemispheres 16.5
2532 Female, age 72, left hemisphere 15.5
2622 Female, age 67, right hemisphere 15.0
2018 Male, age 76, both hemispheres 13.2
2692 Male, age 74, both hemispheres 7.2
Perirhinal gyrus
nTPM: 27.3
1841 Female, age 85, right hemisphere 31.6
2521 Female, age 94, right hemisphere 30.6
1847 Female, age 91, left hemisphere 30.3
1794 Male, age 80, right hemisphere 26.8
2848 Male, age 76, right hemisphere 17.1
Subiculum
nTPM: 10.5
1901 Male, age 80, both hemispheres 16.7
1977 Female, age 85, both hemispheres 16.2
2619 Male, age 74, both hemispheres 9.6
2438 Female, age 94, left hemisphere 8.3
2042 Male, age 76, both hemispheres 6.3
2729 Female, age 91, right hemisphere 5.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.5
Samples: 255

Max nTPM: 20.5
Min nTPM: 0.0
Std nTPM: 3.7
Median nTPM: 2.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 20.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 19.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 18.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 17.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 16.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 16.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 16.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 15.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 14.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 12.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 11.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 22.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.1
FF:10169-103B7 60 years, female 29.0
FF:10153-102I9 76 years, female 15.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 52.6
Pig sample Sample description nTPM
Subiculum
nTPM: 31.8
Samples: 4

Max nTPM: 52.1
Min nTPM: 22.2
Sample A Female 52.1
Sample B Female 24.4
Sample C Male 28.6
Sample D Male 22.2
Dorsal hippocampus
nTPM: 38.6
Samples: 4

Max nTPM: 65.9
Min nTPM: 24.4
Sample A Female 24.4
Sample B Female 32.4
Sample C Male 31.7
Sample D Male 65.9
Entorhinal cortex
nTPM: 52.6
Samples: 4

Max nTPM: 62.4
Min nTPM: 43.3
Sample A Female 62.4
Sample B Female 54.8
Sample C Male 43.3
Sample D Male 50.0
Ventral hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 26.5
Min nTPM: 13.4
Sample A Female 13.4
Sample B Female 23.7
Sample C Male 25.0
Sample D Male 26.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 24.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.0
Samples: 4

Max nTPM: 27.3
Min nTPM: 21.2
Sample A Male 25.4
Sample B Male 27.3
Sample C Female 21.2
Sample D Female 22.1
Hippocampal formation
nTPM: 15.2
Samples: 4

Max nTPM: 18.0
Min nTPM: 13.3
Sample A Male 18.0
Sample B Male 13.3
Sample C Female 14.6
Sample D Female 14.7

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