HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:168.4 nTPM
HPA Brain:55.9 nTPM
GTEx:168.4 nTPM
FANTOM5:64.8 Scaled Tags Per Million
Pig:99.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 55.9
Sample id Sample description nTPM
Hippocampus
nTPM: 55.9
1898 Male, age 80, left hemisphere 68.4
2529 Female, age 94, left hemisphere 59.1
1911 Female, age 85, right hemisphere 57.7
2621 Female, age 67, right hemisphere 52.5
1855 Male, age 76, left hemisphere 52.2
2148 Female, age 91, left hemisphere 45.7
Dentate gyrus
nTPM: 46.4
2010 Male, age 76, both hemispheres 59.3
2530 Female, age 94, left hemisphere 48.8
2528 Male, age 74, both hemispheres 48.0
1927 Female, age 91, both hemispheres 46.4
2246 Female, age 85, both hemispheres 39.4
2531 Female, age 67, both hemispheres 36.5
Entorhinal gyrus
nTPM: 38.4
2117 Female, age 91, right hemisphere 45.1
1787 Male, age 76, left hemisphere 42.9
2764 Male, age 80, right hemisphere 42.1
1938 Female, age 85, left hemisphere 41.3
2686 Male, age 75, right hemisphere 37.8
2613 Female, age 94, left hemisphere 20.9
Hippocampus, CA1
nTPM: 51.4
2527 Male, age 74, both hemispheres 58.3
2045 Male, age 76, both hemispheres 55.9
2749 Male, age 80, left hemisphere 54.7
1873 Female, age 85, both hemispheres 49.8
2082 Female, age 91, right hemisphere 38.5
Hippocampus, CA2
nTPM: 50.8
1963 Male, age 80, left hemisphere 58.1
1940 Female, age 85, left hemisphere 55.3
2249 Male, age 74, both hemispheres 53.4
1892 Male, age 76, both hemispheres 48.0
2437 Female, age 94, left hemisphere 46.3
2113 Female, age 91, right hemisphere 43.9
Hippocampus, CA3
nTPM: 47.5
2436 Male, age 74, both hemispheres 68.1
1867 Male, age 76, both hemispheres 56.7
1891 Female, age 85, both hemispheres 50.1
2137 Male, age 80, left hemisphere 48.5
2620 Female, age 94, left hemisphere 39.6
2861 Female, age 67, both hemispheres 22.3
Parahippocampal cortex
nTPM: 41.8
2018 Male, age 76, both hemispheres 55.6
2250 Female, age 67, right hemisphere 51.8
1933 Female, age 85, both hemispheres 50.0
2245 Female, age 91, both hemispheres 45.6
1850 Male, age 80, both hemispheres 40.7
1990 Female, age 91, right hemisphere 38.2
2532 Female, age 72, left hemisphere 37.9
2622 Female, age 67, right hemisphere 35.2
2693 Female, age 94, both hemispheres 32.1
2692 Male, age 74, both hemispheres 30.7
Perirhinal gyrus
nTPM: 41.7
1847 Female, age 91, left hemisphere 50.5
1841 Female, age 85, right hemisphere 47.7
1794 Male, age 80, right hemisphere 45.3
2521 Female, age 94, right hemisphere 32.5
2848 Male, age 76, right hemisphere 32.4
Subiculum
nTPM: 45.0
1901 Male, age 80, both hemispheres 54.6
2042 Male, age 76, both hemispheres 51.3
2619 Male, age 74, both hemispheres 47.6
2729 Female, age 91, right hemisphere 45.0
1977 Female, age 85, both hemispheres 41.5
2438 Female, age 94, left hemisphere 30.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 168.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 168.4
Samples: 255

Max nTPM: 369.4
Min nTPM: 70.0
Std nTPM: 49.1
Median nTPM: 156.8
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 369.4
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 359.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 313.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 301.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 301.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 277.9
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 277.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 276.2
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 266.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 266.1
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 265.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 64.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.8
FF:10169-103B7 60 years, female 81.0
FF:10153-102I9 76 years, female 48.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 99.1
Pig sample Sample description nTPM
Subiculum
nTPM: 82.5
Samples: 4

Max nTPM: 87.7
Min nTPM: 77.6
Sample A Female 85.9
Sample B Female 78.6
Sample C Male 87.7
Sample D Male 77.6
Dorsal hippocampus
nTPM: 99.1
Samples: 4

Max nTPM: 116.5
Min nTPM: 87.2
Sample A Female 116.5
Sample B Female 102.9
Sample C Male 87.2
Sample D Male 89.7
Entorhinal cortex
nTPM: 82.8
Samples: 4

Max nTPM: 95.3
Min nTPM: 71.0
Sample A Female 71.0
Sample B Female 83.4
Sample C Male 95.3
Sample D Male 81.6
Ventral hippocampus
nTPM: 99.1
Samples: 4

Max nTPM: 116.2
Min nTPM: 77.1
Sample A Female 102.6
Sample B Female 77.1
Sample C Male 116.2
Sample D Male 100.4

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